Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211550g00004 ATGAAGAAAATAGTGGCCAATGATTTGTTGTCCCCACAAAAGCATCAATGGCTTCAACACAAAAGGAACCAAGAATCCAACCACCTTATGTTTCATGTGTACAACAAGTGCATGAATAATAACAATAATAACGTTAATAAGGACAATTATTGTTGTGGCCTTGTTAATGTTAGAAGTGTTGCAAGGCACTATTGTTTCAATGTGACAAAGAAGCTAATCTTCAATGTAAGGCACTTTGGTGAAGGTGGCATTGATGGTGGGCCATCTTTTGAGGATGAGGAGCATCTTATTAGTGGCACTTTTAGATTGCTTAAACACATTTATGCATTTTGTGTCACCGATTACTTGCCATGGTTGAAGGGGTTATTATATGACTTTGGTGGGCATAAGTGTGAGATTAAGGAAGCTATGAGGATTATGAGCAAGTATCATGATCCAATAATTGAAGAAAGAATCAAGCAATGGAAGAATGATGGGTTGCGGAGCGAAGAAGAAGACCTTCTTGATGTTTTGATCAATTTGAAAGATTCCGATAATACACCATTGTTGACATCCAAGGAGATCAAGTCACAAATTATAGAATTGATGATGGCAACCTTGGATAATCCATCAAATGCAGTTGAATGGACACTTGCAGAAATGATAAACCAACCTGAATTGCTTCAAAAAGCAATTGAAGAATTGGACATAGTTGTTGGAAGAGATAGAATGGTTGAAGAATCAGACATCCCTAAGCTGAACTATATAAAAGCTTGTGTAAGAGAAGCTTTTCGTCTTCATCCAATTGGGCCTTTCAATATTCCTCACCTCTCAATGAAGGACACAATGATTGAAAATTACCTAATCCTAAAGGGTAGCCATATCCTCCTAAGTAGAAAAGGACTTGGGAGAAACCCTAAAGTTTGGAAGGAGCCACACAAGTTCAAACCCGAACGACACCTCAATAGTGATGGTAATGATGTCGTTTTGGCAGAGCCTAATTTGAGGTTCATATCATTTAGCATCGGAAGGTGTGGTTGCCCTGGAGTGATGCTTGGAACCACAATGACTGTCATGCTATTTGCAAGATTGCTTCATGTCTTCTATTGGAAGGCACCTCTCAAAGTGTCAAGCATTAACCTTGATGAGTCTAATGATAGTTTGCTTCTTGCTAAACCACTTGTAGCCATGGCAAAGCCTAGATTAGCTACTGAGTTGTACCGATTGAGTTAG 1212 0.3886 MKKIVANDLLSPQKHQWLQHKRNQESNHLMFHVYNKCMNNNNNNVNKDNYCCGLVNVRSVARHYCFNVTKKLIFNVRHFGEGGIDGGPSFEDEEHLISGTFRLLKHIYAFCVTDYLPWLKGLLYDFGGHKCEIKEAMRIMSKYHDPIIEERIKQWKNDGLRSEEEDLLDVLINLKDSDNTPLLTSKEIKSQIIELMMATLDNPSNAVEWTLAEMINQPELLQKAIEELDIVVGRDRMVEESDIPKLNYIKACVREAFRLHPIGPFNIPHLSMKDTMIENYLILKGSHILLSRKGLGRNPKVWKEPHKFKPERHLNSDGNDVVLAEPNLRFISFSIGRCGCPGVMLGTTMTVMLFARLLHVFYWKAPLKVSSINLDESNDSLLLAKPLVAMAKPRLATELYRLS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211550g00004 403 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 400 - -
Stsc211550g00004 403 SUPERFAMILY Cytochrome P450 8 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 250 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 330 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 187 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 340 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 291 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 PRINTS E-class P450 group I signature 207 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 Gene3D Cytochrome P450 1 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00004 403 Pfam Cytochrome P450 34 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211550g00004 Stsc-Chr211550 46659 48823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211550g00004 1 400 Cytochrome P450 AT4G39950 51.621 7.16e-143 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211550g00004 - K14984 gmx:100809902 554.288