Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211550g00001 ATGAACACCGAAATTGCATGTTTCCACATAGGAAATGTCCATGTTATCCCTGTAACATGTCCTAAAATTGCTTGTGAATTCCTAAGAAAACAAGATGCTGCTTTTGCTTCAAGGCCATTAAGCATGGCGACCGAAACCGCCACAAATGGTTACTTGACAACAGCTCTTACACCCTTTGGGGAGCAATGGAGGAAAATGAAGAAAATAGTGGCCAATGATTTGTTGTCCCCACAAAAGCATCAATGGCTTCAAGACAAGAGGAACCAAGAATCCAACCACCTTATGTTTCATGTCTACAACAAGTGCATAAACAACAACAATAATAATGATGTTAATAAGGACAATTATTGTTTTGGCCTTGTTAATGTTAGAAGTGTTGCAAGACACTATTGTTTCAATTTGACAAAGAAGCTAATCTTCAACGTAAGGCACTTTGGTGAAGGTGGCATTGATGGTGGGCCATCCTTTGAGGATGAGGAGCATCTTAGTGGCACTTTTAAATTGCTTGATTACATTTATGCATTTTGTGTCACAGATTACATGCCATGCTTGAAGGGATTTTATGATTTTGGTGGGCATGAGTGTGAGATTAAGGAAGCTATGAGGATTATGAACAAATATCATGATCCAATCATTGAGGAAAGAATCAAGCAATGGAATGATGGGCTGCGGAATGAACAAGAGGACTTTCTTGATGTTTTGATCAATTTGAAATATTCAAATAATGCACCATTATTGTTGACATCCAAGGAGATCAAGTCACAAATTATAAATGGCAATGGGTCAGGATGTGGTGGAGCAAGACGGGAGTTTATGATGGCAACAGTGGATAATCCATCCAATGCAGTCGAATGGGCACTTGCAGAAATGATAAACCAACCTGATTTGCTTCAAAAAGCTATTGAAGAATTGGACATGGTTGTTGGAAGAGAGAGAATGGTGGAAGAATCTGATATCCCTAAGCTAAACTATATAAAAGCTTGTGTAAGAGAAGCTTTTCGCCTTCATCCAACTGCACCTTTCAATATTCCTCATGTCTCAATGAAAGAAACAATAATTGGAAATTACCTAATCCCAAAGGGTAGCCATGTCCTGCTAAGTAGACAAGGACTTGGCAGAAACCCTAAAGTTTGGAACGAGTCGCACAAGTTCAAACCCGAACGACACCTCAATAGTGATGGTGATGATGTCGTTTTGACCGAGTCCAATTTGAGGTTCATATCATTTAGCATCGGAAGGCGTGGTTGCCCTGCTGTCATGCTTGGAACCACAATCACCGTGATGCTATTTGCAAGATTGCTTCATGGCTTCTATTGGAGTGCACCTCCCAATGTGTCAAGCATTAATCTTGCTGAGTCTAATAATAGTTTGCTTCTTGCTAAGCCACTTGTAGCCATGGCAAAACCTAGATTAGCTGTTGAGTTGTACCAATTAATTAGCTAG 1443 0.3992 MNTEIACFHIGNVHVIPVTCPKIACEFLRKQDAAFASRPLSMATETATNGYLTTALTPFGEQWRKMKKIVANDLLSPQKHQWLQDKRNQESNHLMFHVYNKCINNNNNNDVNKDNYCFGLVNVRSVARHYCFNLTKKLIFNVRHFGEGGIDGGPSFEDEEHLSGTFKLLDYIYAFCVTDYMPCLKGFYDFGGHECEIKEAMRIMNKYHDPIIEERIKQWNDGLRNEQEDFLDVLINLKYSNNAPLLLTSKEIKSQIINGNGSGCGGARREFMMATVDNPSNAVEWALAEMINQPDLLQKAIEELDMVVGRERMVEESDIPKLNYIKACVREAFRLHPTAPFNIPHVSMKETIIGNYLIPKGSHVLLSRQGLGRNPKVWNESHKFKPERHLNSDGDDVVLTESNLRFISFSIGRRGCPAVMLGTTITVMLFARLLHGFYWSAPPNVSSINLAESNNSLLLAKPLVAMAKPRLAVELYQLIS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211550g00001 480 PANTHER STEROID 21-HYDROXYLASE-RELATED 4 450 - -
Stsc211550g00001 480 SUPERFAMILY Cytochrome P450 5 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Stsc211550g00001 480 Pfam Cytochrome P450 5 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 Gene3D Cytochrome P450 2 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 23 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211550g00001 480 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211550g00001 Stsc-Chr211550 3756 6471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211550g00001 1 479 Cytochrome P450 AT2G22330 51.875 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211550g00001 - K14984 gmx:100809902 651.358