Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211547g00011 ATGTACACCTCAAGGAGGAAGATACACAAAGATAAGGATGTTGAGCCAACTGAATTTGAAGAGTCTGTTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGTGAACTGAAAGATTTATACATAAATTCTGCCGTCCAAGTCGATGTTTCTGGGGGTCGAAAGGCTGTTGTTATCCATGTTCCCTACAGATTAAGGAAAGGTTTCCGGAAGATACATGTCAGGCTTGTCAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTCTTCATTGCCACCCGTAGGATATTGAGGCCACCAAAGAAAGGATCCGCAGTTCAGCGCCCCCGAAACCGTACACTCACTGCTGTGCACGAGGCAGTGCTTGAGGATATTGTGTTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATCGTGTGGATGGGTCCACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACCGAATACAAGTTGGAGACTTTTTCTGCAGTATACAGGAAGCTTTCAGGCAAAGATGTTGTGTTTGATTACCCTGCTCAAGAGGCTTAG 576 0.4497 MYTSRRKIHKDKDVEPTEFEESVGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVFIATRRILRPPKKGSAVQRPRNRTLTAVHEAVLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFDYPAQEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211547g00011 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc211547g00011 191 Coils Coil 27 47 - -
Stsc211547g00011 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc211547g00011 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211547g00011 Stsc-Chr211547 68035 70192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211547g00011 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 77.487 4.40e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211547g00011 K02993 - gmx:100499757 350.132