Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211541g00023 ATGAATCACTCTTCAGCAGATCATGATCGGGATCAGTGTATGAAGAAGCGAAAATCAAGTGCTGAAACCTCATCAAGCATGAGGAAATCCAGCTCAAAAAGAAGATTCAGCAGCAGCAAGAACAACGATGACGGTGAGAGAAGCAGTAACAAAGGAGGTGGAGGAGGAGGCGTGTCAACTACGCTGAAGTTGTACGATGATCCATGGAAAATCAAGAAAACCTTAACTGACAGCGACCTTGGAATTCTGAGCAGACTGTTGTTGGCAGCTGATTTGGTGAAGAAGCAGATCCTTCCGATGCTGGGTGGCGATCAAGCTCGAGCAGCAGAAACAGAAGAAGGAACTCCGGTGAGAGTATGGGATATGGACACTCGATCTATGCACCAGTTGGTCCTGAAGCGTTGGTCATCTTCCAAAAGTTATGTTCTTATTGGAAAATGGAATCAAGATTTTGTGCGAAGGAGGGAGCTGAAGAAAGGGGACGAAATTGGCTTCCACTGGGATCCGTATAACTGCGCCTTCAACTTTTGCGTTCTTACACGCGCTACGGCCACCACCAACTACTGA 567 0.4691 MNHSSADHDRDQCMKKRKSSAETSSSMRKSSSKRRFSSSKNNDDGERSSNKGGGGGGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGGDQARAAETEEGTPVRVWDMDTRSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLTRATATTNY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211541g00023 188 Gene3D - 68 185 IPR015300 -
Stsc211541g00023 188 MobiDBLite consensus disorder prediction 1 23 - -
Stsc211541g00023 188 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 24 181 - -
Stsc211541g00023 188 CDD B3_DNA 69 179 IPR003340 GO:0003677
Stsc211541g00023 188 SUPERFAMILY DNA-binding pseudobarrel domain 67 178 IPR015300 -
Stsc211541g00023 188 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211541g00023 Stsc-Chr211541 121348 121914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211541g00023 53 172 RAV Transcription Factor Family AT1G51120 33.607 6.89e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211541g00023 - - gmx:102667341 258.455