Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211541g00007 ATGGCAACCGCAACCAGAAGATCCAAGCGTAAGCTTCATCTTGAACCACCACCGCCAAAAATCACATGCAAGAAGCTTCGGTCAAACCTCCCTCGCCGGCGACGGTCTCAGATCTCACCGCTGGTTATTTCTTCCACTAGATTCAATGCTTCCAGAGAAAATCCTCGTTTTCCTGGAATATCTGTGGATTCTGATTCTTGCTCTGACGACTTCGCCGGAGGCGAAGCTTCGTGTAACTCGAGCAGAGCTTCAGCTGTTTTCGCCGGAAATGGAGGAGGATGTTCCAAATCCAGAGGAAGATTGCAATGCGAAATCTCGAGAAATAGGAGATTCAAGAAGCAAAATGAAAGTGAACTCTCGGAGTCTTCGTGTGTGGAGTCCAACGACAGAGGTCACGAACAGAGCAGGAGCTTGATTCTTCAAAGCAAGCTTATGGAATCCGATGAGGTAATTTTGAAGTTCAGAAGCGAAAATCAGAGACGAAACGATGAATTCTCTGAAGCATGCACGAAATCTGAGATCACGTGTGAGGATTCGAAGTCCGGTTACCGAAATTTGAAAGCGTCGTCGGAAACGAAGAAGAGAAACGACGTCGTTTCGTTTAGCTCCTCTGGTGCTCCTGCGACGTCGTTTACGGAGGGAAAGAGCATATCAATCTGCAAGATAAACGGAGAATCGGAATTAGAATTCTCTGAATGTTCGAGAAACCTCCGCGAGGATGATAGTAACTGTGTTGATTTGACAGAAAAATCGAAGATCAATCAAATTACGAATAGCTCCGATCTCAATTGCGCAGAGCAATTGCGATTCACATATTCCAACGAAGACGAAGACGTAGAAGACGATGAATCGGAGTACTATTCGAGTCAGGGAACCGTGCTCTCTGATCTTCGCTCAGAGATCTTTAGCTTCCCTGAGTGCTCAGAACTTGAACTTTCTGATTACACTCCGTCGCTATTCATCGATTCAGGAAGCCAATTCTCGCAGGGATCCGTTGGAGAAACTCCTTCTCCAACTTACTCCTTGTTTCTTCAGTTCCGTAACGAGTTCAACACGCTAATTATAACTTCAGTCAACAACAATTCTTCAAGCGTCAAAGATGAGGTCGTTCCTATTCATGCCAAGTTTGTTAAGTTCGATGATTTGGCCGAAGAAGAAAGCTACGTGATGCTGAGAGAGAGGGAGAGGAAGCAAGTTCTTCTGTGGAATTTTACAGATAACTATTTTTCTACCACTGAATTCGGGAAACTTGTGATTCAGCAACGCTCGCAAATGGTTCAGTGGATCATTGAGAAATTCACCATAAATGGGCAGCAATCCTATCGAAAACAGCTTCGGCAAGAGACATTGTTTCTTGGAGTCAGCCTCTTTGACCGCTTCTTAAGCAAAGGATATTTTAAAGTCAAGAGAAACCTTCAGATTGCTGGGATCGCCTGCCTGACATTGGAGCAAAAGAATTTCTATATTGGAAGTAATGTATACAGTAGATGCGAGGTGGTGGCTATGGAATGGGTGGTGCAAGAAGTTCTCAAGTTCCAGTGTTTCATTCCGACCATCTACAACTTCTTGTGGTTCTACTTAAAAGCTGCTAAAGCTGATGCAGCTGTGGAGAGGAGAGTCAAGTCTCTGGCAGTGCTGGTACTATCAGCTGAGGAGCAGCTATGTTACTGGCCCTCTACAGTTGCTGCAGCAATTGTAATCCTGGCTTCTCTCCAAGTCAATCAAAATGCCTTCCACACAGTCATAGGGGTCCACGTAAGATCAAAAGATGAGAATTTGCATGAATGCTTAGAGGTATGGTAA 1803 0.4476 MATATRRSKRKLHLEPPPPKITCKKLRSNLPRRRRSQISPLVISSTRFNASRENPRFPGISVDSDSCSDDFAGGEASCNSSRASAVFAGNGGGCSKSRGRLQCEISRNRRFKKQNESELSESSCVESNDRGHEQSRSLILQSKLMESDEVILKFRSENQRRNDEFSEACTKSEITCEDSKSGYRNLKASSETKKRNDVVSFSSSGAPATSFTEGKSISICKINGESELEFSECSRNLREDDSNCVDLTEKSKINQITNSSDLNCAEQLRFTYSNEDEDVEDDESEYYSSQGTVLSDLRSEIFSFPECSELELSDYTPSLFIDSGSQFSQGSVGETPSPTYSLFLQFRNEFNTLIITSVNNNSSSVKDEVVPIHAKFVKFDDLAEEESYVMLRERERKQVLLWNFTDNYFSTTEFGKLVIQQRSQMVQWIIEKFTINGQQSYRKQLRQETLFLGVSLFDRFLSKGYFKVKRNLQIAGIACLTLEQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFIPTIYNFLWFYLKAAKADAAVERRVKSLAVLVLSAEEQLCYWPSTVAAAIVILASLQVNQNAFHTVIGVHVRSKDENLHECLEVW 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211541g00007 600 Gene3D - 510 599 - -
Stsc211541g00007 600 PANTHER CYCLINS 359 597 IPR039361 -
Stsc211541g00007 600 Pfam Cyclin, C-terminal domain 517 598 IPR004367 -
Stsc211541g00007 600 Pfam Cyclin, N-terminal domain 420 512 IPR006671 -
Stsc211541g00007 600 MobiDBLite consensus disorder prediction 1 38 - -
Stsc211541g00007 600 SUPERFAMILY Cyclin-like 383 513 IPR036915 -
Stsc211541g00007 600 Gene3D - 407 509 - -
Stsc211541g00007 600 SUPERFAMILY Cyclin-like 516 597 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211541g00007 Stsc-Chr211541 37273 42056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211541g00007 422 576 Core Cell Cycle Gene Families AT5G25380 32.164 9.24e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211541g00007 K21777 - gmx:100817658 576.63