Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211541g00006 | ATGAGGCTCGATTACGTCAACTACACAGTCTCCGGTGACGGCAGCATCATGAACGAATTGACTCCTCAGAATTTCTCAGTCTGCGAAGCCACTTGCAGAACAAACTCAAACTGTTTGGGCTTCGGATTCAAGTACGATGGATCCGGTTACTGCGTTACGTTAGTCGGTAAAGAGCTTCAGTACGGTCACTGGTCGCCCGGAACGGATACAGCGTTGTTCATCAAAGTAGATGAATCAGAATCTAAAGAACCTTCTAATTTCGTTGGGCTTACTGAGGTTATGCAAACGAGTTGCCCAGTGAGGATAAGCCTCCCTCTGCCACCGAAAGACTCGAACGCCACCACTAGGAACATCATCATAATCTGCACACTATTTGCAGCAGAGCTTATTTCTGGTGTGGCTTTCTTCTGGTCTTTTCTAAAGAGATACATCAAATACAGGGACATGGCCACTACTTTAGGCCTTGAGCTCTTACCAGCTGGTGGCCCCAAAAGGTTTACTTACTCTGAGCTCAAGGCAGCAACCAATGATTTCTCCAACCTCATAGGAAGAGGCGGATTTGGGGCTGTTTACCGAGGCGAGTTGCCGGACCACCGAGTCGTTGCTGTGAAATGCTTGAGAAATGTTTCCGGCGGCGATGCGGAGTTCTGGGCTGAGGTCACCATCATTGCCAGAATGCACCACCTCAATTTGGTTAGACTATGGGGATTCTGTGCTGAGAAAGGACAAAGAATTCTCGTGTATGAATACATCCCTGGTGGCTCATTGGACAAGTACCTATTTAGGGCGAACAATTCCAAAAAGGGTGACTCAAACACACAGCAGGAGAAGCCTATTTTGGATTGGAGTGTGAGGTATAGAATTGCTCTTGGCGTAGCAAGAGCTATTGCATATTTGCATGAAGAGTGTTTAGAATGGGTTCTACACTGTGACATCAAGCCTGAGAATATTCTATTAGGGGATGATTTTTGTCCTAAGATATCTGATTTTGGACTTGCTAAGTTAAGGAAAAAAGAGGATATGGTAACAATGTCTCGGAGGAGGGGTACTCCGGGTTACATGGCTCCTGAATGGGTAACTGCGGATCCAATAACTTCAAAGGCTGATGTATATANNNNNNNNNNGAACTTTGAGAGTCCTGGGTCTTTGGTAAAGAGTGATGAGTGGTACTTCCCAGGTTGGGCATTTGATAAGATGTTCAAGGAAATGAGGATTGAGGACATTCTTGATGGCCATATTAGGGAAATGTATGATACAAGGGCCCATTTTGACATGGTTAATAGGATGGTGAAGACTGCTATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCTACAATGGGGAAAGTGGCTAAGATGTTGGAAGGAACTGTGGAGATTACTGAGCCCAAGAAACCCACTGTATTCTTCCTTGGGGAAGAATAG | 1425 | 0.4547 | MRLDYVNYTVSGDGSIMNELTPQNFSVCEATCRTNSNCLGFGFKYDGSGYCVTLVGKELQYGHWSPGTDTALFIKVDESESKEPSNFVGLTEVMQTSCPVRISLPLPPKDSNATTRNIIIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSNLIGRGGFGAVYRGELPDHRVVAVKCLRNVSGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRANNSKKGDSNTQQEKPILDWSVRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWVTADPITSKADVYXXXXNFESPGSLVKSDEWYFPGWAFDKMFKEMRIEDILDGHIREMYDTRAHFDMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITEPKKPTVFFLGEE | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211541g00006 | 474 | Gene3D | Transferase(Phosphotransferase) domain 1 | 251 | 469 | - | - | |
Stsc211541g00006 | 474 | ProSitePatterns | Protein kinases ATP-binding region signature. | 182 | 204 | IPR017441 | GO:0005524 | |
Stsc211541g00006 | 474 | PANTHER | OS07G0415500 PROTEIN | 13 | 469 | - | - | |
Stsc211541g00006 | 474 | Pfam | Protein kinase domain | 180 | 448 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211541g00006 | 474 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 307 | 319 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc211541g00006 | 474 | FunFam | S-receptor-like serine/threonine-protein kinase | 147 | 250 | - | - | |
Stsc211541g00006 | 474 | SUPERFAMILY | Protein kinase-like (PK-like) | 158 | 455 | IPR011009 | - | |
Stsc211541g00006 | 474 | ProSiteProfiles | Protein kinase domain profile. | 176 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211541g00006 | 474 | Gene3D | Phosphorylase Kinase; domain 1 | 149 | 250 | - | - | |
Stsc211541g00006 | 474 | SMART | serkin_6 | 176 | 454 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211541g00006 | 474 | FunFam | Serine/threonine-protein kinase | 251 | 465 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211541g00006 | Stsc-Chr211541 | 34558 | 36548 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211541g00006 | 17 | 466 | Receptor kinase-like Gene Family | AT4G18250 | 32.218 | 1.85e-69 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Stsc211541g00006 | Pkinase | 6.4e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211541g00006 | - | - | ahf:112783437 | 915.605 |