Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211540g00012 ATGCAGCCTGACAACAAGGACTTTGGAAGTCCACGTGTGGCAAGGATTGTGATGACAGCCGCAGCAAAGAACTTGACTCCGGTTACATTAGAGCTGGGTGGAAAATGCCCAGCCATTCTTGATTCACTGCCTAATCCTTCAGATTTTAAGTTGGCAGTGAAAAGAATCGTAGGAGGGAAGTGGGGACCTTGCAGCGGACAGGCATGCATTGGGATAGACTATGTGCTTGTTGAGGACAAACTCTCTTCTCATTTGATAGAACTACTAAAGAAGTTTGTTAGAAGATTTTATGGGGAGAAGCCATTAGAGTCAAAAGTGATATCCAGAATAGTAAACAAGCAGAACTTCACGAGACTCTGCAATCTTCTTAAAGATCCTCATGTCGCAGCTTCCATCGTTCATGGTGGTTCTGTAGAAGAAAAACACCTGTTCATTGAGCCCACAATCTTGCTTGATCCTCCGTTAGATGCTGACATAATGACTGAAGAAATTTTTGGCCCTCTTCTTCCCATAATCACGGTGAATAAAATTGGGGAAAGTGTTGAGTTTATCAATTCAAGGCCAAAACCTCTTACCATTTATGCCTTCACCAAAGATGAGACTTTAAAGAGAAGAATTCTTTCAGAAACGTCCTCAGGGAGTGTCACATTCAATGACACAATGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGGCAAAGTGGTTTTGGAAGTTACCATGGGAAGTATTCCTTTGACACATTCAGCCATGAAAAAGCAGTAATGCATAGAAGCCTATGCCTTGAAATTGAGCCAAGATACCCTCCTTGGAGCAACTTCAAGCTTGAATTTCTCAGATTGGCATACAAACTAAACTACTTTGGACTATTACTGCACATCCTGGGTTTGAAAAGATACAAGTAG 912 0.4167 MQPDNKDFGSPRVARIVMTAAAKNLTPVTLELGGKCPAILDSLPNPSDFKLAVKRIVGGKWGPCSGQACIGIDYVLVEDKLSSHLIELLKKFVRRFYGEKPLESKVISRIVNKQNFTRLCNLLKDPHVAASIVHGGSVEEKHLFIEPTILLDPPLDADIMTEEIFGPLLPIITVNKIGESVEFINSRPKPLTIYAFTKDETLKRRILSETSSGSVTFNDTMVQFLCDTLPFGGVGQSGFGSYHGKYSFDTFSHEKAVMHRSLCLEIEPRYPPWSNFKLEFLRLAYKLNYFGLLLHILGLKRYK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211540g00012 303 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 252 IPR016162 GO:0016491
Stsc211540g00012 303 SUPERFAMILY ALDH-like 9 273 IPR016161 GO:0016491
Stsc211540g00012 303 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 35 237 IPR016163 GO:0016620
Stsc211540g00012 303 FunFam Aldehyde dehydrogenase 34 237 - -
Stsc211540g00012 303 PANTHER ALDEHYDE DEHYDROGENASE 9 294 IPR012394 GO:0006081
Stsc211540g00012 303 Pfam Aldehyde dehydrogenase family 9 257 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211540g00012 Stsc-Chr211540 105967 110580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211540g00012 9 301 Aldehyde Dehydrogenase Gene Family AT4G36250 64.164 5.34e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211540g00012 K00128 - gmx:100809812 522.316