Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211540g00010 ATGGGAATTAATGGTGATGAATTTTTAGAAGAGAGTGTGAGAGAGTTGAGGCAATACTTCAGAAGTGGAAGTACAAGAAGTGTTTCATGGAGGAAGAACCAGCTCACAGCTTTGCTTGATCTTGTTCAACAAAATGAAGATGCCATATCTCACTCTCTTTACCAAGATCTTGGCAAGCATCCTGTTGAAGCTTATCGCGACGAGAGTAATATACCATTGCTTTTCTTCCCAGCAAAAGGAGAAGTAGTGTCAGAACCACTTGGTGTCGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATGCTGGCATTGGATCCACTAATCGGTGCTATAGCTGCTGGAAATGTCGTTGTAATAAAGCCTGCAGACTTAGCTCCAGCATGCTCTTCATTTCTTGCAAACACCATTCCTCGCTACTTGGATTCTAACGCTATTAGGGTCATTGAGGGAGGTGCAGCAGTTTCTGAACAACTATTACTACAGAAATGGAACAAAATTTTCTTCACTGGTCTGATATGA 519 0.4143 MGINGDEFLEESVRELRQYFRSGSTRSVSWRKNQLTALLDLVQQNEDAISHSLYQDLGKHPVEAYRDESNIPLLFFPAKGEVVSEPLGVVLIFSSWNFPIMLALDPLIGAIAAGNVVVIKPADLAPACSSFLANTIPRYLDSNAIRVIEGGAAVSEQLLLQKWNKIFFTGLI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211540g00010 172 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 170 IPR016162 GO:0016491
Stsc211540g00010 172 PANTHER ALDEHYDE DEHYDROGENASE 9 70 IPR012394 GO:0006081
Stsc211540g00010 172 Pfam Aldehyde dehydrogenase family 80 170 IPR015590 GO:0016491
Stsc211540g00010 172 SUPERFAMILY ALDH-like 6 170 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211540g00010 Stsc-Chr211540 91088 98525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211540g00010 7 170 Aldehyde Dehydrogenase Gene Family AT4G36250 54.545 2.23e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211540g00010 K00128 - gmx:100808513 257.299