Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211538g00006 ATGCACTTGGTGTTGCGCCACACCATGACGCTTCCTACTGATTCAACACCACCACCGCCACCTTCTCCTCCTCCACCTGATTCCGCCACTGACACCGCTACATCCAACGGCGGAACCTCCACCACCGCCACCGCCGCCACCTCATCTTCCGAAAACCCACCGGATTCCCTCCCAACACCGCCGCAAGAGCTCCAGCTCCCAATTTCATGGCCGCAAGACGGAGCCTTGAGCCTCGAATGGATCCACAATCTGATGCAGTGTTTCGATTGGTCTTCGAAGAATCTTCCTCCTTCCGAGTTCCCTTCTGTTCTTCCAGTTCAGGCCTTCGACTCTCTCATCCTCGTTGCTTCCAAGATGCTCCATAAGGAACCGAATTGCGTAACCGTTGATCCGTTTCGCCCTAATTCCGGCACGACGGCGTCCGTGGTGGTCGTTGGTGACGTTCACGGTCAGTTGCATGATCTGCTTTTTCTCCTCAAAGACGCAGGTTACCCTTCCGATGATCGAATCTTCGTCTTCAATGGTGATTACGTTGATCGTGGAGCTTGGGGGCTCGAAACTTTCATGCTCTTGTTAGCTTGGAAGGTGTTTATGCCTCATAATGTATATCTGCTACGTGGGAATCATGAATCAAAATACTGCACATCGGTCTATGGTTTTGAGAAGGAAGTGATGGCAAAGTATGGTGATAAAGGTAAGCATGTATACCGCAAATGCTTGGGATGCTTTGAGGGTCTTCCTTTGGCTTCCATTGTAGCAGGGTGTGTATTCACAGCTCATGGGGGACTCTTCCGCAGTCTAACGGTGACGCCATCAAAGAGATTAAAAGGGAAGAAGAACAGAAAGATTCATCTTAATCATGATAGCAAAACTTTAACTCTTGGTTCCTTGGAAGAATTGTCTAAGGCTCGACGGTCAGTTCTTGATCCACCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCGTCAAAAAATCCTGGTCTTGCCCCGAACAAAGAAAGAGGGATTGGCTTGTTGTGGGGTCCCGATTGTACTGAAGAGTTTTTGAAGAAGTATCAATTAAAGGCAACAGAGGAGAGGTATAACAATAAGGGAGCCTATGTTGTCCTTGAACCCCCAAATTTTGACAATGCTATATTTCATGGATTTACAGCAGTTACTCCAAGGCCAAAGGTGAATGCCTATTATAATTTTGAAGAGGTGATAGATTCTGACGAAGAATTGGACTTGGAGTCCATGGTGACCTCTTTGGGTTGA 1272 0.4788 MHLVLRHTMTLPTDSTPPPPPSPPPPDSATDTATSNGGTSTTATAATSSSENPPDSLPTPPQELQLPISWPQDGALSLEWIHNLMQCFDWSSKNLPPSEFPSVLPVQAFDSLILVASKMLHKEPNCVTVDPFRPNSGTTASVVVVGDVHGQLHDLLFLLKDAGYPSDDRIFVFNGDYVDRGAWGLETFMLLLAWKVFMPHNVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHVYRKCLGCFEGLPLASIVAGCVFTAHGGLFRSLTVTPSKRLKGKKNRKIHLNHDSKTLTLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKATEERYNNKGAYVVLEPPNFDNAIFHGFTAVTPRPKVNAYYNFEEVIDSDEELDLESMVTSLG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211538g00006 423 Gene3D - 99 417 IPR029052 -
Stsc211538g00006 423 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 51 360 - -
Stsc211538g00006 423 MobiDBLite consensus disorder prediction 13 28 - -
Stsc211538g00006 423 PRINTS Serine/threonine phosphatase family signature 301 328 IPR006186 GO:0016787
Stsc211538g00006 423 PRINTS Serine/threonine phosphatase family signature 141 168 IPR006186 GO:0016787
Stsc211538g00006 423 PRINTS Serine/threonine phosphatase family signature 241 267 IPR006186 GO:0016787
Stsc211538g00006 423 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Stsc211538g00006 423 PRINTS Serine/threonine phosphatase family signature 204 228 IPR006186 GO:0016787
Stsc211538g00006 423 MobiDBLite consensus disorder prediction 29 53 - -
Stsc211538g00006 423 SUPERFAMILY Metallo-dependent phosphatases 102 391 IPR029052 -
Stsc211538g00006 423 SMART pp2a_7 104 395 IPR006186 GO:0016787
Stsc211538g00006 423 MobiDBLite consensus disorder prediction 1 67 - -
Stsc211538g00006 423 Pfam Calcineurin-like phosphoesterase 141 361 IPR004843 GO:0016787
Stsc211538g00006 423 ProSitePatterns Serine/threonine specific protein phosphatases signature. 205 210 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211538g00006 Stsc-Chr211538 38249 42256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211538g00006 67 362 Calmodulin-binding Proteins AT5G63870 70.370 8.16e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211538g00006 K04460 - gmx:100810695 660.988