Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211532g00011 ATGAATCTTCTTACAATGGTGGACAATAGCAATAATAACGTTGTTTTGTTGGGCTCAGGGTTCAGCATGTTTGGCATGAGAGCAAGAATTGCATTGGCAGAGAAAGGAATCAAGTATGAGTACAAGGAAGAAGATCTCAGCAACAAGAGCTCCTTGCTCTTAGAAATGAATCCAATTCAAAAGAAGATCCCAGTTCTCATACACAATGGGAAGCCAATTGGTGAGTCCCTCATAATTCTTGAGTATATTGATATGGTTTGGAACAACAACAATAATGGTGCAGCTCCAATAATGTTACTTCCTTCTGATCCCTATGACAAAGCTCAAGCCAGATTCTGGGCTGATTTTGTAGATCACAAGGTGTATCATGCTTCTAGGAGAATATGGACTTCCAAAGGAGATGAGCAAGAGTTGGCTAAGAAGGGTTTCATTGAGAGCATGAAACAATTGGAGGAATTTCTTGGAGACAAGCCTTATTTTGGAGGGGAGAATTTTGGGTTTGTTGATGTTGCTCTCATCCCTTTCTATTGTTGGTTTTATACATATGAGATGTTTGGCAACTTCAAACTTGTGACTTTTTGTCCTACAATCATCTCATGGGCTAATAGATGCATCAAGAGTAGAGAAAGTGTGTCTATGACTCTTGCAGATGGGAAGGAGGTTTATGAGTCTGTTTTGGATTACAAGAAGAAATTTTTGATGGACTAA 708 0.3912 MNLLTMVDNSNNNVVLLGSGFSMFGMRARIALAEKGIKYEYKEEDLSNKSSLLLEMNPIQKKIPVLIHNGKPIGESLIILEYIDMVWNNNNNGAAPIMLLPSDPYDKAQARFWADFVDHKVYHASRRIWTSKGDEQELAKKGFIESMKQLEEFLGDKPYFGGENFGFVDVALIPFYCWFYTYEMFGNFKLVTFCPTIISWANRCIKSRESVSMTLADGKEVYESVLDYKKKFLMD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211532g00011 235 CDD GST_C_Tau 104 228 IPR045074 GO:0004364|GO:0006749
Stsc211532g00011 235 Gene3D - 103 235 - -
Stsc211532g00011 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 91 IPR004045 -
Stsc211532g00011 235 Gene3D Glutaredoxin 10 98 - -
Stsc211532g00011 235 Pfam Glutathione S-transferase, C-terminal domain 139 182 - -
Stsc211532g00011 235 SUPERFAMILY Thioredoxin-like 13 122 IPR036249 -
Stsc211532g00011 235 SUPERFAMILY GST C-terminal domain-like 99 232 IPR036282 -
Stsc211532g00011 235 SFLD Glutathione Transferase (cytosolic) 11 233 IPR040079 -
Stsc211532g00011 235 SFLD Main.3: Omega- and Tau-like 11 233 IPR045073 -
Stsc211532g00011 235 CDD GST_N_Tau 14 87 - -
Stsc211532g00011 235 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 18 219 IPR045073 -
Stsc211532g00011 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 232 IPR010987 -
Stsc211532g00011 235 Pfam Glutathione S-transferase, N-terminal domain 20 84 IPR004045 -
Stsc211532g00011 235 FunFam Tau class glutathione S-transferase 8 95 - -
Stsc211532g00011 235 FunFam Glutathione S-transferase U20 103 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211532g00011 Stsc-Chr211532 100584 101753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211532g00011 12 233 Glutathione S-transferase Gene Family AT1G78380 58.559 1.04e-92 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211532g00011 K00799 - gmx:548030 338.961