Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211532g00006 ATGGCTGAACAAATCCCCTATGGTGTTGCTACTTCCCTCATCAACAAGATTGCTTCGATAGCCTTTCGTGAAATTGGGAGCATCTATGGAGTCATGGATGACCTTGACAAGCTCAAGGACACTCTGGAATCCATCAAGGTTGTGCTTTCTGATGCTGAGCTGAGACAAGGCCAAGAAGATACTGTTGTGCACTGGGTCAGAAGGTTCAGACAAGTTCTCCATGATGCTGATGACTTGCTTGATGACGTCTTCATTCAACTCTTGCGCCGCAGAGCTAATGCTGCCACCAAAAAAATGAGCAAGGTGCGTGGCTTCTTTAGCATATCTCATAATCCAATTGTTTTTCGTGCTAAGTTAGCCCATAAGCTTAAGAATATTCGGAAGGACTTTAATGCTGTTGCTGAAGATATGTCTAAGTTGAATCTGAATCGGAGTCTGGTAATTCTTAAGCAAGATGAGAGTGCTTGGAGAGAAACAAGTTCTGTTGTTTTGCAGTCGGAGATAATTGGCAGGGAAGAGAATAAGAGTGACATTCTTAACTTGCTGAAGCAAGAAAACCATCCAAACCATAATGTTTCTTTGGTGGTGGTTGTTGGTATGGGGGGTTTGGGGAAGACGGCCCTTGCTCAGCTGGTCTACAATACTGCTCAGGAAAAGGGCATGTTCCAGAAATATATGTGGGTGTGCGTTTCTGAAGATTTTGGAGTGAAAACTATTTTGAAGAAGATGCTGGAGTCCTTGAAGAAGGATGCAGGTGGTCACTCATTGGAGGCTCTACAACAAAAGGTGCGAGAAGAACTCAATGGGCAGAAGTATATGCTTGTACTTGACGACGTTTGGAACGAAGATCATTTAAAGTGGAGCGATTTAAGAACTCATTTGATGTGTGGAGCTCAGGGCAGTAAAATATTAGTGACAACCCGCAGTATGCTGGTTTCAGAAGCAATGGGTATAAGCGTTCCTTATACTTTGAAAGGTTTGACAGAGGAGCAATCATGGACTTTGCTAAGGAACTTGGCATTTGCTGAAGATGATAGCATGTTGAGCCCAGAACTCCAATCAATCGCTGAACAAATTGCTTCCAGGTGTGGCGGAGTACCACTGGCAATCAAAACTTTGGGAGGTTTCTTACAGACAACAAATGGAGACATTGATCAATGGTCTAGTATTTTGAAGGGCGATATTTGGGAGTTGTGTAAAGAAAAGCAGAGTATTGTGCCAGTGTTAGAGTTGAGTTACCAAAAGTTACCTCTTGAATTAAGACAGTGTTTTGCTTACTGTTGTTTGTATCCAAAAGACTCGGTAATTCAGAAGGATGAACTAATTCAACTATGGATGGCTCAAGGATACCTTTCAAGTTCCAATGAAAGGCAACCTTTGGAAGATGTGGGCAATCATTATGTCAAAATTTTGATGATGAGGTCATTTTTTCAGGATACATCAATGGATGAATTTGGGCATATTGAGTCCTTCAAAATGCATGATTTGATTCATGATCTTGCAATGTCTGTAGCTAGTAACGATTGTTACTTAGATACCGAGGGAAGAGGAATTGTTGGAAAACCCATGCACGTAGCCTTTGAAACTGGCACCAATTGTTCGCTGGATGTGTTTGACATTTGCAAATTGCGGACAATCATCCTTTGGGAAAGGGCTACTGATTTAATGGTCAAATTGCTTCCTTTTACTGAAAAATTGAAGTGCCTCCGTGCTTTGGGTGTGTCGTCTTGTCCTCTAACTCAGTTGCCAAAGTCCATTGATAAGGTCAAGTATTTAAGATATCTTGATCTTTCAACCTCTAATCTAAGTAGTTTGCCTGAGTCAGTTGTTAGTTTGCCTGAGACGGTTGAGAATCTTGTTTGTTTACAAAAATTAAACCTTGAAGGTTGCCCGAATCTTGTTTTCCCTGTTGAAGTCATCACAAAATTGATCAATCTGAGGGAGCTTAAAATCGAAGAATGTAAAGCCTTTGAAATGATGATGCCAGTAGGATTGGGAAAACTGACTTCATTGCAATGGTTATCAAACTTTGTAGTGGGTAATTCTGAGAAGAGAACAAGTGGCAGATTGAATGAATTGAAAGAGCTTAATAATATCAGAGGCAAGTTTTGCATTAGTAGATTGGGTTCGGTCAGAGACGTGGCATCAGAATCACACGAGACAAATCTAAGATCAAAAAAATACATTCAAGACCTTCGTTTGTTATGGGGGGCAGCACTACATGATTCAGGTGAATATGAAAATAAAAATAGTGATAGCTTGATGTTATTGGATAATCTTCGTCCTCATCAGAATCTGAAAAGACTATACGTAAGTGGCTTTCCAGGAGTGAAGTTTTCAGATTGGGTTATCTCACTCACTAATATTGTGAGTATTAAGTTCTGCCATCTTCCTAACTGCGAACATCTGCCAAGTTTAGAAAGACTGCCTTGCCTTGAGGAGCTCGAAATTATGAATATGAAAAAATTGGAGAGGATAGGAGATGATAAGGCGGGAAATGAGAATGAAGTCCATGTTTCTGTACCTCCTTTTCCCCGTCTCTTTTGTCTGATAATATTGGATTGTCCAAAGTTGACATACACGCCCCCTTTCCCACACGTTTTGGAGTTGCATTTAGAAAGATGTATGGTGAAGGCGATTTTGGAAACATGTATGGTTATGCATGACACTTCCTCCTTTTCTCCTCTTTCTGCTCTCAAGCACTTGCAGCTTAATGAAGTTAGAGAGATAGAAGCAATGGCTGAGGATTGGATGAAGAACCTCACTTCCCTCGAGAGTCTCAAGCTATTGGGTTCATCAACCGTTGAGGTTGTGTTACGACAACTGCAGCATCTTCCTTCTCAACTTGAAGCGTTGTGGATAACTCACAGTGACGACAAGCTTGACCTCTGGAAAGACGAGTACCATAAATGTGGTGGTCCTCCCCGCGCACTCTCTTCTCTGCAGAGTATCACCTTCAACAATTGTGACAATATGAAGGCTTTACCGGATCAGATCGGCGACCTCCAATCACTCACACTTCTTGATATTTATGATTGCCCAAAAGTAGAGTCATTGCATGAAGCTGAGCGTTGCCTCACCAACCTACACAGACTCTATATCACAGGTTGTCCACTCCTAAAGCGCAGATACTCAGCTGAAAGTGGAGAAGATCGACCCAAGATTGCTCACATCCCAGACATATACATAACATGA 3195 0.4153 MAEQIPYGVATSLINKIASIAFREIGSIYGVMDDLDKLKDTLESIKVVLSDAELRQGQEDTVVHWVRRFRQVLHDADDLLDDVFIQLLRRRANAATKKMSKVRGFFSISHNPIVFRAKLAHKLKNIRKDFNAVAEDMSKLNLNRSLVILKQDESAWRETSSVVLQSEIIGREENKSDILNLLKQENHPNHNVSLVVVVGMGGLGKTALAQLVYNTAQEKGMFQKYMWVCVSEDFGVKTILKKMLESLKKDAGGHSLEALQQKVREELNGQKYMLVLDDVWNEDHLKWSDLRTHLMCGAQGSKILVTTRSMLVSEAMGISVPYTLKGLTEEQSWTLLRNLAFAEDDSMLSPELQSIAEQIASRCGGVPLAIKTLGGFLQTTNGDIDQWSSILKGDIWELCKEKQSIVPVLELSYQKLPLELRQCFAYCCLYPKDSVIQKDELIQLWMAQGYLSSSNERQPLEDVGNHYVKILMMRSFFQDTSMDEFGHIESFKMHDLIHDLAMSVASNDCYLDTEGRGIVGKPMHVAFETGTNCSLDVFDICKLRTIILWERATDLMVKLLPFTEKLKCLRALGVSSCPLTQLPKSIDKVKYLRYLDLSTSNLSSLPESVVSLPETVENLVCLQKLNLEGCPNLVFPVEVITKLINLRELKIEECKAFEMMMPVGLGKLTSLQWLSNFVVGNSEKRTSGRLNELKELNNIRGKFCISRLGSVRDVASESHETNLRSKKYIQDLRLLWGAALHDSGEYENKNSDSLMLLDNLRPHQNLKRLYVSGFPGVKFSDWVISLTNIVSIKFCHLPNCEHLPSLERLPCLEELEIMNMKKLERIGDDKAGNENEVHVSVPPFPRLFCLIILDCPKLTYTPPFPHVLELHLERCMVKAILETCMVMHDTSSFSPLSALKHLQLNEVREIEAMAEDWMKNLTSLESLKLLGSSTVEVVLRQLQHLPSQLEALWITHSDDKLDLWKDEYHKCGGPPRALSSLQSITFNNCDNMKALPDQIGDLQSLTLLDIYDCPKVESLHEAERCLTNLHRLYITGCPLLKRRYSAESGEDRPKIAHIPDIYIT 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211532g00006 1064 Gene3D Ribonuclease Inhibitor 688 883 IPR032675 -
Stsc211532g00006 1064 Gene3D Ribonuclease Inhibitor 884 1047 IPR032675 -
Stsc211532g00006 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 427 IPR027417 -
Stsc211532g00006 1064 Gene3D Ribonuclease Inhibitor 523 687 IPR032675 -
Stsc211532g00006 1064 FunFam Probable disease resistance protein At1g61300 150 321 - -
Stsc211532g00006 1064 Pfam Rx N-terminal domain 11 97 IPR041118 -
Stsc211532g00006 1064 Gene3D - 150 320 IPR027417 -
Stsc211532g00006 1064 Gene3D - 413 503 IPR036388 -
Stsc211532g00006 1064 Coils Coil 907 927 - -
Stsc211532g00006 1064 FunFam Probable disease resistance protein At1g63360 413 503 - -
Stsc211532g00006 1064 SUPERFAMILY L domain-like 492 1041 - -
Stsc211532g00006 1064 Coils Coil 35 55 - -
Stsc211532g00006 1064 Pfam NB-ARC domain 172 413 IPR002182 GO:0043531
Stsc211532g00006 1064 PANTHER DISEASE RESISTANCE PROTEIN RP 35 827 IPR044974 GO:0006952
Stsc211532g00006 1064 PRINTS Disease resistance protein signature 194 209 - -
Stsc211532g00006 1064 PRINTS Disease resistance protein signature 363 377 - -
Stsc211532g00006 1064 PRINTS Disease resistance protein signature 266 280 - -
Stsc211532g00006 1064 PRINTS Disease resistance protein signature 1000 1016 - -
Stsc211532g00006 1064 Gene3D - 326 412 IPR042197 -
Stsc211532g00006 1064 Gene3D - 10 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211532g00006 Stsc-Chr211532 59966 63355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211532g00006 176 374 WRKY Transcription Factor Family AT5G45050 26.540 2.02e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211532g00006 - - adu:110272418 1337.4