Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211530g00016 ATGTCTCTTCTTTCCTTCTCCTTCTTCTTCTTCTTCACACCCATTCTTGCTTCCACCGAGTTCGACTTTGGAACCTTAACACTCAGTTCCCTCAAGCTCCTCGGCGACGCTCACTTGGACAACGGAAACGTCTCCCTCACGCGCGACCTCCCCGTCCCCAACTCCGGCTCCGGCAGAGCCTTATACTCTCGTCCCATCCGATTCCGTCAACCGGGAACCCACTCTCCGGCAAGCTTCCGAACCTTCTTCTCATTTTCCGTAACAAATTTCAACCCTTCCTCCATTGGCGGCGGCCTCGCATTTGTCCTCTCGCCGGACGACGACTCCCTCGGCGACGCCGGCGGCAGCCTCGGTCTGGCCGCCGCCGCAACGAAGTTCGTCGCCGTTGAATTCGACACGTTAATGGACGTTGAGTTCAAGGACATTAACGGTAACCACGTCGGCGTGGACTTAAATAGCATGGTTTCGGCGAAGGCTTTCGACTTGGGATTGATCAATGTCGATCTCAAAAGCGGTGACACGGTGAACGCGTGGATCGAGTTCGATGGATCAACGACGGTTTTAACCGTTTGGGTCTCTTACTCAAATCTCAAACCCAAAGACCCCATTTTGACGATGAATCTTGACGCCGATCGATACTTGAACGATTTCATGTACGTAGGGTTTTCTGGTTCTACGCAGGGAAGCACCGAGATTCACAGTGTTGATTGGTGGAGCTTTAGCTCTTTCTTTCCGCCGTCCTCGTCGGCGGCGGGGGCGCCGCCGCCGCCGGCGGTTACTCTGATGAACCCGGGGGCTACGTCGTCGTCGCTGTCTCCGCCGCCGTCGATTGCGCCTTCAGTGGCACAAAAGGAGAGTAAGTCTTCTTCTTGCCACAATGGTTTGTGTAAAGAGAATTTGGGTGCGGTTGCTGGTGTTGTTACTGCTGGTGCCTTTGTTCTTGCTTTATTTGCTGGTGCTTTGATTTGGGTTTATTCTAAGAAATTCAAGCGTGTTAAGAAATTGGATACACTTGGTTCTGAGATTATTAAGATGCCTAAGCAGTTTAGTTATAAGGAATTGAGGGCTGCTACTAAGTGTTTCAGTGCTAATAGGATAATTGGTCATGGTGCTTTTGGTACTGTGTATAAGGGTGTTATGCCTGAGAATGGCGAAATTGTTGCGGTCAAGAGGTGTAGCCACAGTAGTCAGGGGAAGAATGAGTTCTTGTCTGAGTTGTCTATAATTGGAACCCTTCGGCACCGGAATCTTGTTAGGCTTCAGGGTTGGTGTCACGAGAAAGGCGAGATTCTGTTGGTGTATGACTTGATGCCCAATGGGAGTTTGGATAAGGCTTTGTACGAGGCCAGGATGCCTCTGCCGTGGTGTCACCGGAGAAAGATTTTGTTGGGGGTGGCATCTGCATTGGCCTACTTGCATCAAGAATGTGAGAATCAGGTTATTCATAGGGACATTAAGACTAGTAACATAATGTTGGATGAAGGGTTTAATGCGAGGTTGGGTGATTTCGGTTTGGCAAGGCAAACTGAGCATGACAAGTCTCCGGATGCCACGGTGGCAGCCGGAACAATGGGGTACTTGGCACCCGAGTATCTCCTTACTGGCAAAGCTACTGAGAAAACCGACGTGTTTAGTTACGGCGCGGTGGTCCTTGAGGTTGCTAGTGGGAGAAGACCAATAGAGAAAGATGCCACGGGGACCGGAAAAGGCGGTGTTAGTAGCAATTTGGTAGAATGGGTTTGGACTTTGCATAGGGAAGGGAGGCTGCTAATGGCGGCAGATCCGAAACTCGAGAATGAATTCGATGAAGCGGAGATGAGGAGGGTGCTTATGGTTGGGCTAGCTTGTTCGAACTCGGATCCGCCGGCTCGGCCTTCGATGAGGAGTGTGGTTCAGATGCTGGTTGGTGATGCTGAAGTTCCTATTGTCCCAACTACGAAACCAAATACAGGTTTAAGTACCTCACACTCTCAACTCTTGTTGAGCTTGCAAGATAGTGTATCTGACATTGATGGAATAATCACCATCTCTACCTCAACTTCAGAGAACAGCTTCAATGGTATGGATATAGTCTGA 2076 0.5014 MSLLSFSFFFFFTPILASTEFDFGTLTLSSLKLLGDAHLDNGNVSLTRDLPVPNSGSGRALYSRPIRFRQPGTHSPASFRTFFSFSVTNFNPSSIGGGLAFVLSPDDDSLGDAGGSLGLAAAATKFVAVEFDTLMDVEFKDINGNHVGVDLNSMVSAKAFDLGLINVDLKSGDTVNAWIEFDGSTTVLTVWVSYSNLKPKDPILTMNLDADRYLNDFMYVGFSGSTQGSTEIHSVDWWSFSSFFPPSSSAAGAPPPPAVTLMNPGATSSSLSPPPSIAPSVAQKESKSSSCHNGLCKENLGAVAGVVTAGAFVLALFAGALIWVYSKKFKRVKKLDTLGSEIIKMPKQFSYKELRAATKCFSANRIIGHGAFGTVYKGVMPENGEIVAVKRCSHSSQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALYEARMPLPWCHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDATGTGKGGVSSNLVEWVWTLHREGRLLMAADPKLENEFDEAEMRRVLMVGLACSNSDPPARPSMRSVVQMLVGDAEVPIVPTTKPNTGLSTSHSQLLLSLQDSVSDIDGIITISTSTSENSFNGMDIV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211530g00016 691 Gene3D Transferase(Phosphotransferase) domain 1 437 640 - -
Stsc211530g00016 691 ProSitePatterns Legume lectins beta-chain signature. 127 133 IPR019825 -
Stsc211530g00016 691 Pfam Legume lectin domain 19 243 IPR001220 GO:0030246
Stsc211530g00016 691 MobiDBLite consensus disorder prediction 254 283 - -
Stsc211530g00016 691 SUPERFAMILY Protein kinase-like (PK-like) 343 657 IPR011009 -
Stsc211530g00016 691 CDD lectin_legume_LecRK_Arcelin_ConA 35 238 IPR001220 GO:0030246
Stsc211530g00016 691 MobiDBLite consensus disorder prediction 262 283 - -
Stsc211530g00016 691 FunFam L-type lectin-domain containing receptor kinase VIII.1 437 652 - -
Stsc211530g00016 691 ProSiteProfiles Protein kinase domain profile. 361 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211530g00016 691 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Stsc211530g00016 691 PANTHER - 46 644 - -
Stsc211530g00016 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 249 IPR013320 -
Stsc211530g00016 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Stsc211530g00016 691 CDD STKc_IRAK 367 634 - -
Stsc211530g00016 691 Gene3D Phosphorylase Kinase; domain 1 324 436 - -
Stsc211530g00016 691 FunFam L-type lectin-domain containing receptor kinase VIII.1 17 253 - -
Stsc211530g00016 691 SMART serkin_6 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211530g00016 691 Pfam Protein kinase domain 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211530g00016 691 FunFam L-type lectin-domain containing receptor kinase VIII.1 325 436 - -
Stsc211530g00016 691 Gene3D - 17 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211530g00016 Stsc-Chr211530 100937 103400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211530g00016 8 673 Receptor kinase-like Gene Family AT3G53380 69.622 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc211530g00016 Pkinase 4.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211530g00016 - - gmx:100810624 1034.25