Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211529g00015 ATGTGCCGCCAAAATTCTCCTGTTCACCATTCCGGCGACGAAGACACCGCCGCCGACGAGAGCCTCTTGATTTACTGCAAGCCTGTTGAGCTTTACAACATCCTCTACCGTCGTTCTCTTCACAACCCTTCATTTCTTAGGAGATCTCTGCGGTATAAAATTAAAGCAAAACGTAAAAAGAGGTTGAGAGCGGGAATTGTGATTTTCAACTACAGGGACTGTTACAACATGATACGAAAGACTGAAGTGACTGAACATTTTTCTTGTCCATTTTGCTTGATGCAATGTGCCAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTGACTGAAGATTACCAAGCAGTTAATGTCTCTGTAAAAATTGATATATCGAGATCAGAGAATGTTGCTGATGGAGTAAATCCACAATCTCAAACCTTCATATTCTGTTCAAGACCCCGAAAACGTTTACGAAAGGACTCTGTTCAAAATGAAAAGCAAGCCAATGTAAAGTTCCTAGAGTTGGAATCACCAGAGGGAACACAGAATGGATTTCTTGAAAAGAACGATGATATCCTCTCCTGCAAAGGGGAGAATATGTCTAAAACAGCTCATATTATGGGGAAACAAGGTGTCGAAAGATTTGGTCCTGATCTTCCTGGCACTGCAGACTGCCTCGAATATGTTGCGTCCAGTTTCAACATTCAAGGTGTTTCAATTGCCATGCCCCAATCTTCAGGAGACCCGGAAACTAGTAAATCAGTATATAGAACTGATCCTGCTGTGCCTGCTAAAACAAAGAAGTTAAACATGGATCGATCTGACTCAAAAAACCGAATGCTACTGCAGAAGAGACAGTTCTTTCACTCTCATAGAGTTCAGCCTATGGCTCTAGAACAAGTGTTATCAGACCGCGATAGTGAAGATGAAGTCGATGATGACATTGCAGATCTTGAAGATCGCAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAACTCATGCATCTGTGGAACTCTTTTATGAGGAAGCAAAGGGTGCTGGCTGATGGCCATGTTTCGTGGGCATGTGAGGCATTTTCGAAGCTTCATGGAAAAGAACTAATCGCATCCCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCACGGTCTTCTTGATGCTTGCACAATGAACAACTGTAGTATAATATTAGATAGTTACAGAAACGAAGGGTCGGATAATGGCAAGAATTAG 1272 0.4159 MCRQNSPVHHSGDEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRSLRYKIKAKRKKRLRAGIVIFNYRDCYNMIRKTEVTEHFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDISRSENVADGVNPQSQTFIFCSRPRKRLRKDSVQNEKQANVKFLELESPEGTQNGFLEKNDDILSCKGENMSKTAHIMGKQGVERFGPDLPGTADCLEYVASSFNIQGVSIAMPQSSGDPETSKSVYRTDPAVPAKTKKLNMDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVSWACEAFSKLHGKELIASPALFWCWRLFMIKLWNHGLLDACTMNNCSIILDSYRNEGSDNGKN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211529g00015 423 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
Stsc211529g00015 423 CDD VEFS-box_EMF2-like 286 413 - -
Stsc211529g00015 423 Pfam VEFS-Box of polycomb protein 273 408 IPR019135 -
Stsc211529g00015 423 CDD ZnB-Zn_EMF2-like 13 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211529g00015 Stsc-Chr211529 72278 79443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211529g00015 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 1.43e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211529g00015 - - gmx:100807112 709.523