Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211529g00007 ATGGCTGAATTCACCTGCTTCTTCTTCTCCTTCTTCATCTTCCTCTTGCTCTTAACCTTCCAAACCTCAATCACCATAGCCACATATTCAGGTTACCAAGATTCAACCAAGTGCAGCCATGGTGGTCCTTCCATCCACTATCCATTCCACATAAAAGGACACAGTCCACTTCATCATGAATCCCTCCCTGGCTTTGAGCTCCTCTGCAAAGAAAACCTCACCACCATCCACTTTCCATCTCACGGCGATTTGGTTGTGAAATCCATTTCCTATGATACCAGAAAGATTCAACTTCTTGATCCCAAGAACTGTGTCCATGGTGTCTTTCTCAACCTCAATCTCTCATCTACACCTTTCCAATACTACTATGTTCTGAAGAACTACACATACCTCAATTGCTCTACAAAGCTCTCCACTCCTTCTTTCACTGAGGTTCCATGCTTGAGTAGTAGCTCAGGTTCTCATGTTTACACTGTTGACCCTGAACTGCATGTGCCTGGTTCTTGCAACGGTTTCAAAACCGTGGCAATTCCTTTCAAGTATAGCCCTTATATCTCAGACAATAGTCTTGGTCTTGCATTGACATGGAACTTGCCTCATTCTGAAGAAACAAAAGAAGCAATAAGCAAGACCACAGATTCCCACACAACACGTTATACAGCTTTAGGATTGAGCATCTGTTCTTTGGTGGCAGCAATTGCACTTATAATAATAATAATAATAGGCATAATAAAGGTTAGTGGGTCCACGTGGAATTGCGGTGAGAAAGAAGATCCATTATTGCAGAGCTTGCCAAATGTCTAG 804 0.4254 MAEFTCFFFSFFIFLLLLTFQTSITIATYSGYQDSTKCSHGGPSIHYPFHIKGHSPLHHESLPGFELLCKENLTTIHFPSHGDLVVKSISYDTRKIQLLDPKNCVHGVFLNLNLSSTPFQYYYVLKNYTYLNCSTKLSTPSFTEVPCLSSSSGSHVYTVDPELHVPGSCNGFKTVAIPFKYSPYISDNSLGLALTWNLPHSEETKEAISKTTDSHTTRYTALGLSICSLVAAIALIIIIIIGIIKVSGSTWNCGEKEDPLLQSLPNV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211529g00007 267 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 244 IPR046948 -
Stsc211529g00007 267 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211529g00007 Stsc-Chr211529 35243 36506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211529g00007 38 206 C3H Transcription Factor Family AT2G25410 31.073 1.09e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211529g00007 - - ahf:112747752 418.313