Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211528g00022 ATGGCTTCTCACCTTGTTCTAATAACACAATGGATTTCCATTGTTGTCATTGTTCTGATATCCCTTAAGGTTAAACCATCAGAGTCACAGTGTTACCCTCAAATTTTCAACACACAGAAATTAAACAATCCAAGACTGGTGCAAGCTCAAGCAGCACTTGAAGCATGGACACATTCCATAACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACTGGCATCTACTGTGCACCAGCACCAGATGACTCCACCGTGTATACAGTGGCTGGAATTGACCTTAAGGATGCAAACATAGCCGGTTCATTACCAGAAGATCTTGGCCTCTTAACCGACCTACACTTCTTCCATATAAACTCCAACAGATTCTCGGGTTCCCTCCCTAACAGTTTTACCAAACTCTCCTTTCTTTATGAGCTTGATATCAGTTCTAACCAATTCTCAGGACCCTTTCCACAAGTTGTTCTTGCCATTCCTTCACTCAGATACTTGGACATTAGGTTCAACAACTTCGCCGGTGACGTTCCTTCCCGCCTTTTCGACCTCAAACTCGACGCTCTCTTCATCAACAATAACAGATTCCAATTCACCTTACCTCAAAACTTTGGGAACTCGCCCGTTTCTGTAATGGTATTATCAAACAATGATATAAAGGGTAGTATTCCATCAAGTGTTGCAAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACAGGGTTAACGGGTCCATTGCCAAAGGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAAATTGGAGGGAGAGCTACCAGGAAGTATGCAAGGAATGAAGAGCTTGGAGCAGTTGAATTTAAAGCATAACAATTTATCAGGTGTGGTTCCAACCAGTATATGTATGTTGCCTAAGTTGGAGCACTTTGATTGCTCAGATAATGACTTCCATGGCCCATTGCCTGAATGTCTCTTCATTCAACCAAAACATAATCGGGAAAATTCATGA 1023 0.4174 MASHLVLITQWISIVVIVLISLKVKPSESQCYPQIFNTQKLNNPRLVQAQAALEAWTHSITSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTVYTVAGIDLKDANIAGSLPEDLGLLTDLHFFHINSNRFSGSLPNSFTKLSFLYELDISSNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDVPSRLFDLKLDALFINNNRFQFTLPQNFGNSPVSVMVLSNNDIKGSIPSSVAKMKDTLNEIIISNTGLTGPLPKEIGYLDKVTVFDVSFNKLEGELPGSMQGMKSLEQLNLKHNNLSGVVPTSICMLPKLEHFDCSDNDFHGPLPECLFIQPKHNRENS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211528g00022 340 Gene3D Ribonuclease Inhibitor 48 214 IPR032675 -
Stsc211528g00022 340 Gene3D Ribonuclease Inhibitor 215 336 IPR032675 -
Stsc211528g00022 340 FunFam Leucine-rich repeat extensin-like protein 1 50 210 - -
Stsc211528g00022 340 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 331 - -
Stsc211528g00022 340 Pfam Leucine rich repeat 263 321 IPR001611 GO:0005515
Stsc211528g00022 340 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 211 301 - -
Stsc211528g00022 340 SUPERFAMILY L domain-like 57 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211528g00022 Stsc-Chr211528 110134 111156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211528g00022 41 339 Leucine-rich Repeat extension Gene Families AT3G22800 61.667 1.88e-127 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211528g00022 - - adu:107488511 545.814