Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211528g00020 ATGGAAAACTATAACAACAACAACTCAGCAGCAATTTGCGTGCGTCCATTTAAGGTATCCGATGCAGATGACTTGCTTTCATGGGGAAGCGACGACAGAGTCACGCGCTTCTTGAGATGGAACTCCATCACATCCAAACAAGAAGCCATCAACTACATAAACAATGTTGCCATGACTCATCCATGGCGCAGATCTATATGCCTCCATGACCGCTCCATCGGATACGTTTCGGTCCGGCCCGAATCGGGTGACTACCGGTGCAAGGCTCATGTGAGCTACGCGGTGGCGGCTCAGCACTGGGGGAAAGGCATAGCCACGGCGGCTCTGAGGATGGCCATACCGGAAGCTTTGAAAGAGTTTCCGGAGGTGGTGAGAGTGGAGGCGCTGGTGGAGGTTGACAATGAAGCCTCTCAAAGGGTTCTCCACAAACTTGGCTTTCACAAAGAGGAGGATTGCACCCAATATTATATCAACCAAGTGAAGGCCAAATTTGATGGGAAATGGCTATGCGGATTGTGCTCGGAAGCAGTAAGGGATGAAGTGAACAGAGGGAAAAAGCTGTCCCCGTCTGGCATGGAAGAAGCTGTGAAAGCTCACATGTCATTCTGTGGTAAGATCAAATCCAATCCGGCAGTTCGCGTGGCCGATGGCATGAGGCAGATGCTGAGGAGAAGGTCAATTGACTTGCCGGGTGCAAGGTCAAGCAGCACTTCTCAAGTGGCTGGTTCATCTGGTTTACCATTGCATTGA 750 0.508 MENYNNNNSAAICVRPFKVSDADDLLSWGSDDRVTRFLRWNSITSKQEAINYINNVAMTHPWRRSICLHDRSIGYVSVRPESGDYRCKAHVSYAVAAQHWGKGIATAALRMAIPEALKEFPEVVRVEALVEVDNEASQRVLHKLGFHKEEDCTQYYINQVKAKFDGKWLCGLCSEAVRDEVNRGKKLSPSGMEEAVKAHMSFCGKIKSNPAVRVADGMRQMLRRRSIDLPGARSSSTSQVAGSSGLPLH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211528g00020 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 170 IPR000182 GO:0016747
Stsc211528g00020 249 Pfam Acetyltransferase (GNAT) domain 12 147 IPR000182 GO:0016747
Stsc211528g00020 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 157 IPR016181 -
Stsc211528g00020 249 MobiDBLite consensus disorder prediction 230 249 - -
Stsc211528g00020 249 MobiDBLite consensus disorder prediction 226 249 - -
Stsc211528g00020 249 Pfam Protein of unknown function (DUF1677) 149 224 IPR012876 -
Stsc211528g00020 249 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 159 - -
Stsc211528g00020 249 Gene3D - 8 179 - -
Stsc211528g00020 249 CDD NAT_SF 73 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211528g00020 Stsc-Chr211528 101427 105185 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211528g00020 Acetyltransf_3 5e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211528g00020 - - mof:131151006 216.083