Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211526g00006 ATGGAGCCGCCGGAAACCTTACCGTTTGAGACGGCCGAGAAGATCATCCTCCGCTGGGACTCCACCGCCTCCGAGGAAGCAAGGGAGAAGATGATCTTCGACGGTGACCGCCACGAGGCGGATCGCTACCTCCAGGCCGTCGATGAAATCCAACGCTCTATGTCTTCTGCTTCCATCTCCGACGACCCCAAGGTCAACTCCGCTCTCCAGATCGCCATGGCTCGACTCGAGGACGAGTTCCGTAACATCCTCATCTCCCACACCAACCCAATCGAAGCTGATTCACTCGTAGATCCCACTTCCCTCCATTTCAGTACCACCGAAGACGAAGAAGAACATGACCACCACGACCAACCACAACAAGAACCACCTCCCGATTCTTCTTCCTCTTCCTCCTCCTTTTCCTCATCTTCAAAGCAACGCCATCACAACGACGGAGACGCCAGCACCGACGCCGACGCCTGCGTCAATCTCCTCCGCTTCAACAGCGGCGACGCTGCTTCCAGCGTCAACAGCAGCTATCGCTCCACTAGCAGCATCCGGGAGATCGATCTGATTCCCGGCGAAGCAGTCTACGACCTCCGCAGCATCGCCGAGAGGATGATCTCCTCCGGCTACCTCCGCGAGTGCATTCAGGTGTACGGAAGCGTGAGGAAGTCCGCCGTGGACGCCAGTTTCCGGAGGCTTGGGATCGAGAAGCTGAGCATAGGCGATGTTCAGCGGCTGGAGTGGGAGCAGCTTGAAGCCAAGATCAGGCGCTGGATAAAGGCCGCCAAGGTCTGTGTCCGGACTCTCTTCGCCAGCGAGAAGAAGCTTTGCGAGCAAATCTTCGATGGCGTCGGCACCGCCANNNNNNNNNNTCCCGCCATTCAGCTCTTCAACTTCGCTGAAGCCATTAGCATAAGCCGGAGATCCCCTGAGAAGCTCTTCAAGATTCTTGACCTTCATGATGCCTTAATGGACCTCATACCTGACATTGATGTCGTTTTCGATTCCAAGTCCTCCGAGTCAATTCGGATTCAGGCCGCTGAGATACTCTCTCGGTTGGCGGAGGCCGCCAGAGGAATCCTCTCGGAGTTCGAGAATGCCGTGCTTCGAGAACCTTCCAGGGTCCCTGTCCCTGGTGGCACCATTCACCCCTTGACGAGGTATGTCATGAACTATATCAGCTTGATCTCAGATTACAAGCAGACTTTGAACGAGCTTATTGTGTCGAAGCCGTCGACAGGGTCTCGGTATTCCGGTGACCCTTCTACTCCGGACATGGATTTTACTGAGCTGGAGGGTAAGACCCCTTTGGCTATTCACTTGATATGGATCATTGTGATATTGCAGTTCAACTTAGATGGGAAGTCCAAGCATTATAAGGATGCTTCTCTCTCTCACCTCTTCATAATGAACAATGTTCACTACATTGTTCAGAAGGTGAGGGGTTCCCCTGAGTTAAGGCAAATGATTGGCGACGAGTATTTGAAGCGCCTCACTGGTAAGTTCCGGCAGGCTGCCACCAGCTATCAGAGGGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGGCTCCATGTGAGTGGTGGCTTTTCTTCCGGGGTCTCGAGGAGTGCTTTGAGGGAAAGGTTTAAGTCCTTCAATGCCATGTTTGAGGAGGTTCATAGGACTCAAGCGGTTTGGTTGATACCGGACTCTCAGCTCAGGGAGGAGCTGAGAATTTCTATATCGGAGAAGCTGATCCCGGCGTATCGCTCGTTTCTTGGGCGGTTCAGGAGCCACATAGAGAGTGGAAGGCATCCAGAGAACTACATTAAATACTCTGTTGAGGACTTGGAAGATGCTGTTTTGGATTTTTTCGAAGGAACACCTGTTTCACAGCACCTGAGGAGGAGATCTCAATGA 1896 0.5295 MEPPETLPFETAEKIILRWDSTASEEAREKMIFDGDRHEADRYLQAVDEIQRSMSSASISDDPKVNSALQIAMARLEDEFRNILISHTNPIEADSLVDPTSLHFSTTEDEEEHDHHDQPQQEPPPDSSSSSSSFSSSSKQRHHNDGDASTDADACVNLLRFNSGDAASSVNSSYRSTSSIREIDLIPGEAVYDLRSIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDVQRLEWEQLEAKIRRWIKAAKVCVRTLFASEKKLCEQIFDGVGTAXXXXPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDVVFDSKSSESIRIQAAEILSRLAEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSPELRQMIGDEYLKRLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSRSALRERFKSFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGTPVSQHLRRRSQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211526g00006 631 Gene3D Exocyst complex component Exo70 15 115 - -
Stsc211526g00006 631 Gene3D Exocyst complex component Exo70 126 627 - -
Stsc211526g00006 631 ProSiteProfiles Sox C-terminal domain profile. 1 110 IPR021934 -
Stsc211526g00006 631 MobiDBLite consensus disorder prediction 104 121 - -
Stsc211526g00006 631 Pfam Exo70 exocyst complex subunit 253 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211526g00006 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 619 IPR004140 GO:0000145|GO:0006887
Stsc211526g00006 631 MobiDBLite consensus disorder prediction 122 139 - -
Stsc211526g00006 631 MobiDBLite consensus disorder prediction 95 150 - -
Stsc211526g00006 631 SUPERFAMILY Cullin repeat-like 37 618 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211526g00006 Stsc-Chr211526 16962 19560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211526g00006 9 631 EXO70 exocyst subunit family AT1G72470 68.346 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211526g00006 K07195 - qsa:O6P43_018425 971.459