Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211526g00005 ATGGCTGTAGCTCCGGCGATAACCCGCCTCCGGCCATCTCTCCTCTTTCTCTCCTACATCTTCACCGGCGTCCAACTCACATTCTCCATGTCAGAAGCTCAAGCTTTGCTTACCCTCAAGAACTCATTCTCCAATTCCCAAGCATTGGCTTCTTGGGTTTCTAACTCTCTTCCCTGTTCCAAACACGATCAATGGGACGGTGTTATATGCTTCAATGGCTTAGTCTCAGGGCTTCGTCTCCGAGGAATGGGGCTATTAGGTGAAATAGATGTTGATGCATTGCTCGAACTCAAGGCTCTCAGAACCATTAGCATTGCCAACAACTCTTTCTCAGGCTCAATCCCTCAGCTCAACAGAATAGGGTTCTTGAAAGCTTTGTATTTGTCTGGAAACAAATTCTCCGGGGATATTCCTTCAGGTTACTTCCAGAGAATGAAGTCTTTGAAGAAATTGTGGCTTTCCAACAATGAATTCACAGGTCAAATCCCTGCATCTTTGGCTGAGATCCCTCAGCTTGTTGAGTTGCATCTTGAGAATAACCAGTTTAGTGGGAATATTCCGAATCTGGAGAATCCTTTGTTGTTGGATCTTGATATGTCCAATAACAAATTGGAAGGTGAAGTTCCGAAGGGTTTGTCCAGGTTCAATGAGAGTTCTTTCCAAGGAAATGATGGAATTTGTGGCGAGAATATTGGGAAGCCATGTGGGAAGAAGCCTTCAGAAGAGAAAATAAGTGTGGTTGTGCAAAGCGACAGCCATGGTGGTAGATGGAAGAACGACACAGTGCAGATTGCTGGCTTTGTTTTAACGAGCTTCTTGCTTGTCTCGCTCATTACTTTCTTCATTGTGCGGTCGAAGCGAAAGGAGAATGAGAATCTTGGTAGGCTTGGAAACGGCGGTGGTAGCGTTGCCGGAGAGTCTGTGCAGGTTCGGGTGAGTGAGCCGGTGACGGTGAGAAAAGGATCGAGCAAAAGAAGGGGAGTGTCTTCTCATGGTGGCAGCAGGGGTGGCGGGATTGGGGAGCTAGTGGTTGTGAACGATGAGAAGGGGGTTTTTGGGTTGTCGGATTTGATGAAGGCGGCGGCGGAGGTGATGGGGAATGGGGGGATTGGGTCTTCTTATAAGGCGGTGATGTCGAATGGGGTGGCGGTGGTGGTGAAAAGGACGAGGGAGATGAATGCGTTGGAGAAAGAAAGTTTTGAAGGTGAGATGTGGAAGCTTGGGAGGTTGAAACATTGGAATGTGTTGACTCCTTTGGCTTACCATTTCAGAAAGGATGAGAAACTAATTATGTCTGAGTATGTGCCCGGGAGCAGTCTTTTGTTTTTGCTTCATGGTGACAGGGGACCATCTCACGCTCAGTTGGATTGGCCAGCACGTTTCAAGATTGTCAAGGGAATCGCTCAAGGCATGCGTTATCTTCACACAGAGCTAGCTTCCTCTAATGTCCCCCATGGCAATCTCAAGTCTAGTAATGTTCTCTTAGGACCAGATTACCAGCCACTCCTTGTAGACTATGGATTCAGCCAAATGGTTAATCCTTCCAATGTAGCACAATTTCTCTCTGCTTATAAGGCTCCTGAAGCCGCACGAGGCCAAGTTTCTCACAAAAGTGACGTGTATTGTCTCGGAGTCGTAATACTCGAGATTCTCACCGGAAAATTCCCTTCTCAGTATCTTAGCAACAATAAGGGCGGGACCGACGTCGTCGAATGGGTCACCTCCGCGATTTCCGAGGGGAGGGAAACAGAATTGCTTGATCCTCTGATTGCAATAAACAACAAGGTTTATATGGGTCAAATGGTTCTACTTCTCCATGTTGGTGCTGCTTGCACGGAAAGCAACCCGGAGAAACGGATTGACATGAAGGAAGCCATAAGAAGGATAGAAGATGTAGGGAAACAGAGTGGCTATGCAGAGTCTCAAGGACATGGTGAGGAATCTAGGCGGAGAGGAGGAACAGAAAGCATTGGAAGTGAGGAATATTTTGAATTTGGCTCCTTCTCCTCAGCAACAACAGCAGCCTAG 2028 0.4729 MAVAPAITRLRPSLLFLSYIFTGVQLTFSMSEAQALLTLKNSFSNSQALASWVSNSLPCSKHDQWDGVICFNGLVSGLRLRGMGLLGEIDVDALLELKALRTISIANNSFSGSIPQLNRIGFLKALYLSGNKFSGDIPSGYFQRMKSLKKLWLSNNEFTGQIPASLAEIPQLVELHLENNQFSGNIPNLENPLLLDLDMSNNKLEGEVPKGLSRFNESSFQGNDGICGENIGKPCGKKPSEEKISVVVQSDSHGGRWKNDTVQIAGFVLTSFLLVSLITFFIVRSKRKENENLGRLGNGGGSVAGESVQVRVSEPVTVRKGSSKRRGVSSHGGSRGGGIGELVVVNDEKGVFGLSDLMKAAAEVMGNGGIGSSYKAVMSNGVAVVVKRTREMNALEKESFEGEMWKLGRLKHWNVLTPLAYHFRKDEKLIMSEYVPGSSLLFLLHGDRGPSHAQLDWPARFKIVKGIAQGMRYLHTELASSNVPHGNLKSSNVLLGPDYQPLLVDYGFSQMVNPSNVAQFLSAYKAPEAARGQVSHKSDVYCLGVVILEILTGKFPSQYLSNNKGGTDVVEWVTSAISEGRETELLDPLIAINNKVYMGQMVLLLHVGAACTESNPEKRIDMKEAIRRIEDVGKQSGYAESQGHGEESRRRGGTESIGSEEYFEFGSFSSATTAA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211526g00005 675 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Stsc211526g00005 675 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Stsc211526g00005 675 Pfam Protein kinase domain 363 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211526g00005 675 MobiDBLite consensus disorder prediction 633 675 - -
Stsc211526g00005 675 Gene3D Phosphorylase Kinase; domain 1 340 434 - -
Stsc211526g00005 675 MobiDBLite consensus disorder prediction 643 657 - -
Stsc211526g00005 675 SUPERFAMILY Protein kinase-like (PK-like) 363 628 IPR011009 -
Stsc211526g00005 675 Gene3D Ribonuclease Inhibitor 142 190 IPR032675 -
Stsc211526g00005 675 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Stsc211526g00005 675 Gene3D Transferase(Phosphotransferase) domain 1 436 652 - -
Stsc211526g00005 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 636 IPR046959 -
Stsc211526g00005 675 Gene3D Ribonuclease Inhibitor 191 238 IPR032675 -
Stsc211526g00005 675 FunFam Nuclear pore complex protein NUP107 29 188 - -
Stsc211526g00005 675 ProSiteProfiles Protein kinase domain profile. 359 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211526g00005 675 SUPERFAMILY L domain-like 30 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211526g00005 Stsc-Chr211526 12219 15564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211526g00005 13 632 Receptor kinase-like Gene Family AT3G42880 46.667 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc211526g00005 Pkinase 6.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211526g00005 - - ahf:112708922 959.518