Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211523g00009 ATGTCAGGACAACAATTAGGAGTGCTTAATGCACTCGATGTTGCAAAGACACAATGGTACCATTTCACAGCAATTGTGATTGCTGGCATGGGATTCTTCACTGATGCCTATGATCTCTTCTGCATCTCCCTTGTCACCAAGTTGCTTGGGAGGATATACTACACAGATATAAAAGAACCAAAGCCTGGTGTTCTACCTCCAAATGTGCAAGCTGCTGTGACAGGTGTCGCGCTATGCGGCACTCTAGCTGGACAGCTTTTCTTTGGTTGGCTTGGTGACAAGATGGGAAGGAAGAGGGTCTATGGACTAACCCTCATGCTCATGGTGGTTTGTTCCATTGCCTCTGGCCTCTCTTTTGGATCCAGTGCAAAGGGTGTTATTGCAACCCTTTGTTTCTTCAGGTTCTGGCTTGGTTTTGGGATTGGTGGTGACTACCCTCTTTCAGCTACAATCATGTCTGAGTATGCCAATAAGAAGACAAGAGGGGCCTTCATTGCTGCAGTGTTTGCTATGCAAGGATTTGGGATCCTTGCTGGTGGAATTGTGGCCTTGATTGTCTCATCTGCATTTGACCATCACTACAAGGTCCCTACTTATAAAGAAAATCCACAAGCATCATTGGTGCTACCTGCATTTGATTACGTTTGGCGTATCATCTTGATGTTTGGTGCTGTGCCGGCTGCTCTGACTTACTACTGGCGTATGAAGATGCCTGAGACCGCTCGTTATACAGCTCTCGTTGCCAAGAATGCTAAACAAGCCGCCTCGGACATGTCCAAGGTGCTACAAGTTGAGCTTGAAGCTGAGGAGGAGAAGGTGAGAGAAATCACAGAGAATCAAAGCCAAAAGTTTGGCTTGTTCAGCAAGGAATTCGCCAAGCGCCACGGCCTGCACTTGTTGGGAACCACAACTACATGGTTCTTGTTGGACATTGCTTTCTACAGTCAGAATCTTTTCCAGAAGGACATTTTCACTGCCATTGGATGGATCCCCCCTTCCCAAAACATGAATGCAATCCATGAGGTTTATAGAATTGCAAGAGCACAAACACTCATTGCATTATGCAGTACTGTGCCTGGATACTGGTTTACAGTGGCCTTCATCGATCACATGGGACGTTTCGCCATCCAATTGATGGCTGCTGCTGGTAAAGCTGGAGCCATTGTTGGTGCATTCGGGTTCTTGTATGCTTCGCAAAGCAAGGACCCCAAGAAGACTGATAAGGGCTACCCAACTGGTATTGGTGTGAAGAACTCCCTCATCATGCTTGGTGTCATCAACTTCTTGGGAATTATCTTCACCTTGTTGGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTAAGGAGAATGAAGATGAAGGTGCTGAGGCTATTGAGATGCAAGGGTCTGCTAGGACTGTTCCAGTTTAA 1416 0.4647 MSGQQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDIKEPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKMGRKRVYGLTLMLMVVCSIASGLSFGSSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHYKVPTYKENPQASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVREITENQSQKFGLFSKEFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPSQNMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDHMGRFAIQLMAAAGKAGAIVGAFGFLYASQSKDPKKTDKGYPTGIGVKNSLIMLGVINFLGIIFTLLVPESKGKSLEELSKENEDEGAEAIEMQGSARTVPV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211523g00009 471 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 471 IPR020846 GO:0022857
Stsc211523g00009 471 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 380 - -
Stsc211523g00009 471 CDD MFS_PhT 25 441 - -
Stsc211523g00009 471 Gene3D MFS general substrate transporter like domains 275 379 IPR036259 -
Stsc211523g00009 471 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Stsc211523g00009 471 Gene3D MFS general substrate transporter like domains 380 465 IPR036259 -
Stsc211523g00009 471 MobiDBLite consensus disorder prediction 447 471 - -
Stsc211523g00009 471 Pfam Sugar (and other) transporter 25 398 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc211523g00009 471 SUPERFAMILY MFS general substrate transporter 12 451 IPR036259 -
Stsc211523g00009 471 Coils Coil 252 279 - -
Stsc211523g00009 471 FunFam Inorganic phosphate transporter 1-6 20 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211523g00009 Stsc-Chr211523 62119 63744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211523g00009 380 455 Inorganic Solute Cotransporters AT3G54700 73.684 7.51e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211523g00009 K08176 - gmx:100802890 667.922