Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211522g00007 ATGGCGGCAGAGGCAGCATTCTCCTTCTCAGTGGCATCCGTCGTGGAGGATGTGCTTCAGCAGCACGGTACTCGCCTCAAAGATCTTGATTTCGAGTCCAGGAAAGCAGAAGAAGCTGCATCCAGAAGATATGAAGCAGCAGGGTGGCTTAGAAAAATGGTTGGAGTTGTTGCAGCCAAAGATTTACCAGCTGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTTTGTAATGTTATTAACAAGGTTCAATCCGGAGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCATTATCAGCATATCAATATTTCGAAAATGTGAGGAATTTTCTGGTTGCTGTCCAGGAAATTGGAATTCCTACTTTTGAGGCATCTGATCTGGAGCAGGGAGGAAAATCATCCAGGATTGTGAATTGTGTCTTGGGCCTTAAATCCTATGGTGAATGGAAACAGAGTGGGGCAAATGGTGTGTGGAAATTCGGGGGAAATCTCAAACCAGCTACATCAACCAAATCTTTTGTGAGAAAGAACTCAGAGCCATTTACTAATTCCTTATCGAGGACCTCATCGCTTAATGAAAAGTCTGTAACTGGTCTTAACTGTGAAGCTGAATCTAATAGTAAAACGTCTGGTTCCCATTCATTGAGTTCGCTTGTTCATGCAATTCTATCAGATAAGAGGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGAGCAAGGTTGTTGAAGAGTTCGAGCATCGGATTGCAAGCCGAGGAGGTGAACAGGTACAGCCAAAGATAGCTTCAAGAGATCCTGTTTCTCAAAGCAATGGCTCTGCATCAAAGTTTGTCATGCCAGATAAAAAGGTGGACAACAGGATTAGTACAGTATCAAAGAAAGATGATTTTATTCAGAAAAGCCGTGTTGCTGAGCAATCAAGAAGCCAACTTTTGAAACAGAAAGAGCTATCTGATCAACAACAGAGAGAGATTCAATTTATCCAAATGAAATTTCAAGAGGAGTTCTCTAATCTAGGTATGCACGTTTGTGGCTTAGCTCATGCTGCTTCCGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATATAATCAAGTTCAGGATCTTAAGGGGAGTATTCGAGTTTATTGTCGAGTAAGACCCTTCTTTCCGGGACAACCAAACCAGTTGAGCACAGTTGAAAATATAGAAGATGGAACTCTCACTGTGCATATTCCTTCCAAGAATGGGAAGGGACGCAAATCCTTCAACTTCAACAAAGTTTTTGGACCATCTGCATCCCAAGCGGAGGTCTTCCTTGATATGCAGCCACTCATTAGATCCGTTCTTGACGGTTTCAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATCACAGAGAAAAGCCAAGGTGTGAACTACAGGGCTCTAAGTGATTTGTTTCTTATAGCAGATCAAAGAAAGGATACTTTCCACTATGATGTTTCTGTTCAAATGATTGAGATATATAATGAGCAAGTCAGGGATCTACTTGTTAAAATCCGTAGTAGTTCCAACAAAGGGCTAAGTGTGCCAGATGCAAGCCTTGTCCCTGTATCATCAACACTTGATGTGATTGAGCTAATGAATCTTGGGCAAAGGAACCGCGCAGTTGGAGCAACAGCCCTTAATGATCGTAGTAGCCGATCTCATAGTTGTTTGACTGTTCATGTTCAAGGAAGAGATTTGACAACTGGAACTGTACTTCGCGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGACAAATCTGAGGCCACAGGAGATAGACTAAAAGAAGCACAGCATATCAACAAATCCCTTTCGGCTCTTGGGGATGTCATTGCTTCTCTTGCTCAGAAAAACTCACATGTTCCTTACAGAAACAGTAAACTCACACAATTGCTCCAGGATTCACTTGGTGGACAGGCCAAGACACTAATGTTTGTTCATATAAGTCCAGAGAGTGAGGCTATTGGAGAAACACTTAGTACCCTTAAGTTTGCAGAAAGGGTTGCCACAGTTGAACTTGGTGCTGCTCGTGTAAACAAAGATAGTGCAGATGTCAAAGAGCTCAAAGAACAGATCGCAAACCTGAAGGCAGCATTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTCTCGGGTAGCTCTGAAAAATACAGGACAAGGACTGGTGATCTATCACCTTATCACCCAAACCAGCGAGGCACAGATGCTGGGGATCGCCCTGGATGCCGGCAACCAATGGTTGAGGTTGGCAATATAGGGCATCAAAGTAAATCCAGATTTAGACACAAGACACAAAGCTTAGATTTTGATGAGATGTCATCAACTTCACCACCCTGGCCCCCAGTAAGTAGTCCTGGGCAGAACTATGCAGAAGATGATAAAGAAACTGGTTCTGGAGAATGGGTGGATAAAGTCATGGTAAACAAGCAAGATATAAACAAAACTGACAACCTCTTAGGATGTTGGGAATCACCCGGGGCAAACGGGAACTTATCCGACGTGTTTTACCAAAAATATCTGCAAGACTCTTCTAAGATGTACTCGGAACAATCTTACAACATGTTCATGGGAGGCAACCAGTTCAACATGATGGCGGGTTCTGATGAAATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCTGAACCTGACTTGCTTTGGCAATTCAATCATTCTAAACTCACCACCATGACCATGACCAATGCAGTTGGATCAAAGACTAAGAGATCTATCCCAAAGTCAGCAAAGAGTCCAGAAATGAGGTAA 2868 0.4306 MAAEAAFSFSVASVVEDVLQQHGTRLKDLDFESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCVLGLKSYGEWKQSGANGVWKFGGNLKPATSTKSFVRKNSEPFTNSLSRTSSLNEKSVTGLNCEAESNSKTSGSHSLSSLVHAILSDKRPEEVPMLVESVLSKVVEEFEHRIASRGGEQVQPKIASRDPVSQSNGSASKFVMPDKKVDNRISTVSKKDDFIQKSRVAEQSRSQLLKQKELSDQQQREIQFIQMKFQEEFSNLGMHVCGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQPNQLSTVENIEDGTLTVHIPSKNGKGRKSFNFNKVFGPSASQAEVFLDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFHYDVSVQMIEIYNEQVRDLLVKIRSSSNKGLSVPDASLVPVSSTLDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTTGTVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESEAIGETLSTLKFAERVATVELGAARVNKDSADVKELKEQIANLKAALARKEGESEHSFSGSSEKYRTRTGDLSPYHPNQRGTDAGDRPGCRQPMVEVGNIGHQSKSRFRHKTQSLDFDEMSSTSPPWPPVSSPGQNYAEDDKETGSGEWVDKVMVNKQDINKTDNLLGCWESPGANGNLSDVFYQKYLQDSSKMYSEQSYNMFMGGNQFNMMAGSDEMDELDAATSDSSEPDLLWQFNHSKLTTMTMTNAVGSKTKRSIPKSAKSPEMR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211522g00007 955 Coils Coil 712 739 - -
Stsc211522g00007 955 CDD KISc_C_terminal 386 707 - -
Stsc211522g00007 955 Pfam Kinesin motor domain 394 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Stsc211522g00007 955 Gene3D - 27 186 IPR036872 -
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 803 832 - -
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 935 955 - -
Stsc211522g00007 955 SUPERFAMILY Calponin-homology domain, CH-domain 38 173 IPR036872 -
Stsc211522g00007 955 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 734 748 - -
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 733 776 - -
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 267 292 - -
Stsc211522g00007 955 MobiDBLite consensus disorder prediction 277 291 - -
Stsc211522g00007 955 SMART kinesin_4 386 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 FunFam Kinesin-like protein KIN-14I isoform A 383 747 - -
Stsc211522g00007 955 CDD CH_AtKIN14-like 42 159 - -
Stsc211522g00007 955 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Stsc211522g00007 955 PRINTS Kinesin heavy chain signature 575 592 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 PRINTS Kinesin heavy chain signature 655 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 PRINTS Kinesin heavy chain signature 606 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 ProSiteProfiles Kinesin motor domain profile. 388 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc211522g00007 955 SMART ch_5 42 160 IPR001715 GO:0005515
Stsc211522g00007 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 737 IPR027417 -
Stsc211522g00007 955 Gene3D Kinesin motor domain 383 746 IPR036961 -
Stsc211522g00007 955 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 804 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211522g00007 Stsc-Chr211522 38817 44218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211522g00007 298 757 Calmodulin-binding Proteins AT5G65930 36.975 9.36e-78 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211522g00007 K10406 - gmx:100795476 1487.63