Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211519g00009 ATGGCCGATTTGTCTGCTATAACGGTGAAGAATACTAATCCTAATGTGGGAGAGGAAGAAACTTTCGTAGTTTTGGATGCATCTGAGATCAGAAGACGATCTAGTCTGGTTGCTACGATTCTTCGAAAGTTTTGGAACCATTACACTATTCGAATTTTTGAAGGCGTGGGTGCATGTCCATCATGCTCTGCTGATTCTATTGAGCAACAAGAGAAGCAACGTTCTTCTTCTTATGTGGAAGCCATCAACAAGAAGAAAAGAAAGAGGGAAGAAAAGAAGAAGAAAACGGCACCATCATCATGGGGGTACTCAACTGAATTGATGATGTATGATGATCAATGGAAGTTGAAGAAGGTTCTGAACGGGAGTGACGTGGGCAACATGAGTAGGATGTTACTTCCCAAGAACATGGCGGAAAAGCTGATGGTGGAGGTAGTTGGTTACAACAACCACAATGATAAAGAAGGCGTCAAAGTTGACATATGTGACATGGACACACACTCCATGCACACTTTTGTATTCAAGAGATGGGGTTCGTCTAGAAGCTACGTCTTCATTGGTACAAGGTCAGAGATTTTATTTTAA 585 0.4171 MADLSAITVKNTNPNVGEEETFVVLDASEIRRRSSLVATILRKFWNHYTIRIFEGVGACPSCSADSIEQQEKQRSSSYVEAINKKKRKREEKKKKTAPSSWGYSTELMMYDDQWKLKKVLNGSDVGNMSRMLLPKNMAEKLMVEVVGYNNHNDKEGVKVDICDMDTHSMHTFVFKRWGSSRSYVFIGTRSEILF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211519g00009 194 MobiDBLite consensus disorder prediction 73 97 - -
Stsc211519g00009 194 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 83 188 - -
Stsc211519g00009 194 Gene3D - 109 192 IPR015300 -
Stsc211519g00009 194 CDD B3_DNA 114 187 IPR003340 GO:0003677
Stsc211519g00009 194 SUPERFAMILY DNA-binding pseudobarrel domain 112 187 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211519g00009 Stsc-Chr211519 82396 83546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211519g00009 74 185 RAV Transcription Factor Family AT3G25730 28.571 2.92e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211519g00009 - - aip:107615737 137.502