Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211519g00002 ATGGGGCATCTCAATTCAGGTGTGTCCTCTTCAAACCAAATTCATGCTGCAGATGATGCACCTGCCAGTGGAGGTGGTTTCAGTCATAATGGCAAATTCAGTTATGGATATGCTAGCTGTGCCGGAAAGAGGTCTTCAATGGAAGACTTTTATGAAACGAGAGTTGATGGTGTGGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGCGTTCGTGCTGCAGAATATGTCAAGCAAAACCTGTTTAGTAATTTGATCAGTCATCCAAAATTCATATCCGACACTAAATCTGCGATTGCTGATGCATACAACCATACTGACTCGGAATTTCTGAAATCTGAAAATAGTCATAACAGAGATGCTGGTTCGACTGCTTCTACTGCGATTCTAGTTGGTGACCGTTTGCTTGTGGCAAATGTTGGGGACTCTAGAGTTGTTATATGCAGGGGTGGTAAAGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGACAAAGGATTGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCCGTTTCTCGTGCATTCGGTGATAGGCTCCTGAAGCAGTATGTCGTTGCTGATCCAGAAATCAAGGAAGAAAAGGTCGATAGCTCGCTCGAGTTTCTTATATTGGCAAGTGATGGCCTATGGGATGTTGTCTCCAATGAGGAAGCTGTTAATATGGTGAAACCAATACAGGATGCAGAGGAGGCAGCAAATAAATTGTTGAAAGAAGCATCTCAAAGAGGAAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGGACCAAGGTGCTTCTTCTGCCTCTTCTAATGTTACCACCACCACCGCCGCCACCACCACCACCTCTTCCAATTCTGTTACCCCATCAAAGTAA 939 0.4473 MGHLNSGVSSSNQIHAADDAPASGGGFSHNGKFSYGYASCAGKRSSMEDFYETRVDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRVVICRGGKAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIKEEKVDSSLEFLILASDGLWDVVSNEEAVNMVKPIQDAEEAANKLLKEASQRGSADNITCVVVRFLMDQGASSASSNVTTTTAATTTTSSNSVTPSK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211519g00002 312 Gene3D - 25 284 IPR036457 -
Stsc211519g00002 312 SMART PP2C_SIG_2 29 280 IPR001932 -
Stsc211519g00002 312 FunFam probable protein phosphatase 2C 59 26 284 - -
Stsc211519g00002 312 CDD PP2Cc 33 280 IPR001932 -
Stsc211519g00002 312 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
Stsc211519g00002 312 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Stsc211519g00002 312 Pfam Protein phosphatase 2C 61 273 IPR001932 -
Stsc211519g00002 312 MobiDBLite consensus disorder prediction 291 312 - -
Stsc211519g00002 312 SMART PP2C_4 24 278 IPR001932 -
Stsc211519g00002 312 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Stsc211519g00002 312 SUPERFAMILY PP2C-like 28 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211519g00002 Stsc-Chr211519 39466 42912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211519g00002 1 293 PP2C-type Phosphatase Gene Family AT4G31750 84.746 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211519g00002 K17506 - gmx:100797070 506.523