Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211518g00012 ATGCTAAAGAAACGCAAACACAAGTTCTTCAAGAAAAATGGAGGTTTGTTACTTCAGCAAATACTCTCTTCAACCGAACTGAACATGGACAAAGGTGTTCTCTTCAGCTTAACCGAATTAGAAAAGGCCACAGACAACTTCAATCCCAACAGAATCATCGGAAAGGGTGGCCAAGGCACTGTCTACAAAGGCATGCTGGTTGATGGTAGAATTGTAGCAGTCAAGAAGTTCAAGGTTCAAGAGAATGCTGAAGAATTCATAAACGAGTTCGTAGTTCTTTCTCAAATCAACCACAGGAATGTGGTGAGGCTCTTGGGGTGTTGTTTGGAGACAGAAATTCCTCTGCTTGTTTATGAATTCATTCCCAATGGAAACCTTTTCGAATATCTCCATGATGATCTGCAAGTGATGACATGGGAAATGCGTTTCAGAATTGCAAATGAAATTGCTGGAGCTTTGTTCTACTTACACTCTGTTGCATCACAGCCCATTTATCATAGAGATATCAAATCCACTAACATTCTGTTGGATGAAAAATACAGGGCTAAAATTGCAGATTTTGGAACATCTAGAATTGTTTCAGTTGAAGCTACTCATTTGACTACTGTTGTTCAAGGTACTTTTGGATATTTAGATCCTGAATACTTCTATACCAGTCAATATACAGATAAGAGTGATGTATATAGTTTTGGAGTGGTTCTTGTTGAGCTTTTAACCGGACAGAAGGCGATATCTTGTGTAAGATCTGATGAAGTGAAGAGTTTAGCTTCTTATTTTGTTGTTACCATGGAAGAGAATAGGCTCTTTGATATAATTGATAAGAGAGTAATGAAGGAGGGAGAGAAAGAGCATATAGCTGCAGTTGCTAATGTTGCATATAGATGCTTGGATTTGAATGGGAAGAGAAGGCCAACCATGAGAAAAGTCACATTGGAATTAGAAGCGATTGGGAGATTCAATAGAATATCCAAATTATTAGTACATGAAAGCCACCATCAAGAAATTGAGCTTCATAGAATTGAGGATTATCCACTCTGGGCTGGATATTCTACCTCAGATTCCTTGCCAACTACAACCACTTCACAATTTTCCTCATAG 1098 0.3834 MLKKRKHKFFKKNGGLLLQQILSSTELNMDKGVLFSLTELEKATDNFNPNRIIGKGGQGTVYKGMLVDGRIVAVKKFKVQENAEEFINEFVVLSQINHRNVVRLLGCCLETEIPLLVYEFIPNGNLFEYLHDDLQVMTWEMRFRIANEIAGALFYLHSVASQPIYHRDIKSTNILLDEKYRAKIADFGTSRIVSVEATHLTTVVQGTFGYLDPEYFYTSQYTDKSDVYSFGVVLVELLTGQKAISCVRSDEVKSLASYFVVTMEENRLFDIIDKRVMKEGEKEHIAAVANVAYRCLDLNGKRRPTMRKVTLELEAIGRFNRISKLLVHESHHQEIELHRIEDYPLWAGYSTSDSLPTTTTSQFSS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211518g00012 365 ProSiteProfiles Protein kinase domain profile. 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211518g00012 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Stsc211518g00012 365 FunFam Wall-associated receptor kinase 2 121 337 - -
Stsc211518g00012 365 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 323 IPR045274 GO:0007166
Stsc211518g00012 365 CDD STKc_IRAK 53 316 - -
Stsc211518g00012 365 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211518g00012 365 FunFam Wall-associated receptor kinase 2 17 120 - -
Stsc211518g00012 365 SUPERFAMILY Protein kinase-like (PK-like) 30 313 IPR011009 -
Stsc211518g00012 365 Gene3D Phosphorylase Kinase; domain 1 15 120 - -
Stsc211518g00012 365 SMART serkin_6 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211518g00012 365 Gene3D Transferase(Phosphotransferase) domain 1 121 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211518g00012 Stsc-Chr211518 51104 52287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211518g00012 5 316 Receptor kinase-like Gene Family AT1G69730 66.562 3.80e-151 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc211518g00012 Pkinase 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211518g00012 - - gmx:100798794 532.332