Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211518g00010 ATGAACGATCCCGCATGCTATGCATCGAAGGAATTCGAAATACAATGCAACATCAGTTACCCGAACGGCAAACCCACTCCCACCCCATACCTGAAGCCTATAAACGACGACGTTCAACAACTTCAAGTGGTATCCATTGACGTATTGAACGGCACGCTCGTTTTCTACAACCCGGCCGTGACTTTAGGCTGCCATCCCGAAGGTATGAACCCTAACGAAGTGATAGACCTGAGAGGTTCCCCCTTTGTGTATTCTCAAAAGAGGAACAAGTTCGTGGCGTTGGGCTGCAACATAGTTACGTATTTGGTTTCAAACGGAATACAAGTTGGAGCTTGTGCTTCGATCTGCGATAGCGACGCCGACGCTAATAGCTTTGAGGAAACAGCAGCCAATTATTGCAGTGGAAAGTATTGCTGTGAATCTTCGTTGCCTTTGTACCTCACGGAATTCAACGTTACAGTTGAAAGCCTTAGAAAGAGTAGTAGCAGTGATGATAAGTGCAGCTATGCGGTGATTGCGGAGGAAGAAGCTTGGGCTAGCTCGGGTTACGCGCTTAGGGATTTATCGAATTTGAATATTATTGCGGTGCTTGAGTGGGAGATTGTGAGCTCGAGTTTGAAACTGCCATATAACTGCAATAACACGAATGTTACGTCTTCGCAACACAGTCACTCAGGTCGGAGATGTTACTGTGACCCTGGATTCACCGGCAATCCCTATATTCAGGGGGGCTGTGTCAAAGATACGATTATTGATCCCCCGGGAAAAAGGCAAGTGACATATTTAGGAATAATCTTAGGAAGCATAGGATCCATCATTTTATTCCTTGGTTCATGGTTATTGTATAAAGTTTTAAGAAAAAGAATAGCAAAGAAGCGCAAAGAAAAAAACTTCAAACAAAACGGAGGTTTGTTGCTGCAACAGAGATTGTCCATGGGTGAAGTTAGTGTTGAAAATGTCAAACACTTCAGACTTAAGGATCTGGAGAAGGCCACAGACAACTTTAATGTGAACAGAGTGCTTGGAAAAGGAGGCCAAGGTACTGTCTACAAAGGCATGCTTGTTGATGGACAAATTGTAGCAGTTAAGAAGTTCAAAGTTGAAGGAAATGTTGAAGAATTCATCAACGAATTCGTTATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGCTGTTTGGAGACAGAGATTCCTCTGCTTGTTTATGAATTCATTCCCAATGGTAATCTCTTCCAATATTTGCATGACCAAAATGAAGATTTACCAATGACATGGGAAATGCGTTTGAGAATTGCCACTGAAGTTGCAGAAGCAATATTTTACTTGCATTCTGCTGCTTCTCAACCCATCTATCATAGAGATGTGAAATCAACAAATATATTGTTGGATGGAAAGTACAGAGCAAAAGTAGCTGACTTTGGAGCATCCAAAATGATTTCTCTTGAAGATACTCACCTCACTACTGCTGTTCAAGGAACCTTTGGCTACTTAGATCCCGAATACTTTCATACCAGTCAATTGACAGAGAAAAGTGATGTGTATAGTTTCGGAGTAGTTCTTGTTGAGCTTTTAACTGGACAAAAACCGATATCATCGTCACGAACTGAAGAAGCCAAAAGTTTGTCACATAATTTTGTTAGCTCTATGGAGGAAAATCGCCTATTTGATATCATTGACGAAAGGGTGGCAAAAGAGGGAGAAAAAGAGCATATAATTACAGTTGCTAATCTTGCTTGTAGGTGCTTAGAGTTAAATGGGAGAAAAAGGCCCAGTATGAAAGAAGTTACAAGTGAACTATATAGGATCTTGAAATTGGAAATGAAGCCTGGTACACAACAAAACAATGAAGAAATTGAGTTTGCTAGAATTGAAGATTACCAATCATGGGCTGCATCTTCTGCTTCTGATATAGGTTCAAATTCAACTCTAAGCAACACAATACCTACTTCAAAGTCAGAGATAATAATGCCTATTCTCTTTAAATAA 1998 0.4049 MNDPACYASKEFEIQCNISYPNGKPTPTPYLKPINDDVQQLQVVSIDVLNGTLVFYNPAVTLGCHPEGMNPNEVIDLRGSPFVYSQKRNKFVALGCNIVTYLVSNGIQVGACASICDSDADANSFEETAANYCSGKYCCESSLPLYLTEFNVTVESLRKSSSSDDKCSYAVIAEEEAWASSGYALRDLSNLNIIAVLEWEIVSSSLKLPYNCNNTNVTSSQHSHSGRRCYCDPGFTGNPYIQGGCVKDTIIDPPGKRQVTYLGIILGSIGSIILFLGSWLLYKVLRKRIAKKRKEKNFKQNGGLLLQQRLSMGEVSVENVKHFRLKDLEKATDNFNVNRVLGKGGQGTVYKGMLVDGQIVAVKKFKVEGNVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFQYLHDQNEDLPMTWEMRLRIATEVAEAIFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASKMISLEDTHLTTAVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLVELLTGQKPISSSRTEEAKSLSHNFVSSMEENRLFDIIDERVAKEGEKEHIITVANLACRCLELNGRKRPSMKEVTSELYRILKLEMKPGTQQNNEEIEFARIEDYQSWAASSASDIGSNSTLSNTIPTSKSEIIMPILFK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211518g00010 665 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211518g00010 665 ProSiteProfiles Protein kinase domain profile. 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211518g00010 665 FunFam Wall-associated receptor kinase 2 305 408 - -
Stsc211518g00010 665 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 611 IPR045274 GO:0007166
Stsc211518g00010 665 Gene3D Phosphorylase Kinase; domain 1 307 408 - -
Stsc211518g00010 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Stsc211518g00010 665 SUPERFAMILY Protein kinase-like (PK-like) 316 604 IPR011009 -
Stsc211518g00010 665 FunFam Wall-associated receptor kinase 2 409 626 - -
Stsc211518g00010 665 CDD STKc_IRAK 341 606 - -
Stsc211518g00010 665 Gene3D Transferase(Phosphotransferase) domain 1 409 631 - -
Stsc211518g00010 665 SMART serkin_6 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211518g00010 Stsc-Chr211518 42718 45132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211518g00010 6 606 Receptor kinase-like Gene Family AT1G16120 44.343 8.09e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc211518g00010 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211518g00010 - - ahf:112796208 805.823