Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211515g00015 ATGGAACTCTACAGCTCTTCCAGACATTGCATTGGAAAAGCATGTGTGCCAGCAAAGGATATCTTGAATGGTATTGAAGATGAGAAATGGGTTAAAATAGTGGGTGAGGGCAGACTCCCCGTAGCTGATGGGGATCCCAAGATCCTGGTGAAGCTAAAATTCTCTGCCGCTACACAACATGAAAACTGGAGTCAAGGCATTAAGGATCCTGAATTTCAGGGAGTTCCTCGCACTTTCTTCAAACAACAAGTGGGATGCAAGGTTACTCTTTACCAAGATGCTCACGTCTCAGACAGTTTTGTCCCGGGAGTAGTCCTTGATGGAGGTGTGACTTATGAGCCTCAGAGATGTTGGGAGGACATGTTTAAAGCAATCAAGGAAGCAAAGCACTTCATATACATAGCTGGTTGGTCTCTTTACACTGAGATTTCTCTGATAAGGGATCCAAATAGGCCACAGGATGGGGGACATAAAACACTTGGCGAGCTGCTTAAGGAAAAGGCGGCAGAGAACGTCAGGGTTGTGCTGCTACTTTGGGAAGATGGAGTTCCAATTCCAGTCATTGGAAAATTCCTTTCAAATTTCTTCGGAATCATGGATACTCATGATAAAGAAACCCAAAGGTATTTTAAAGGCACTAATGATATACACTGTGTTTTATGCAGTCGTGATAGTGATAATAAATCCTCTCATCACCAAAAGATTGTGGTGGTGGATGCTGAGTTGCCAAATGGAAAGCAGCAGCAGCAGCCAAATAAAAGAAGAATTGTGAGTTTCATTGGAGGTATTGATCTTTGTAACGGAAGATACGATACTCCAACTCATTCACTCTTTGGAACCTTGAAAGGTGAACACATTGATGATTTTTATCAAAAATGTATTCCTGACGCCACAATTGAGAAGGGTGGTCCCAGGCAGCCATGGCATGATGTGCATTGTAAGCTTGAAGGGCCAATTGCATGGGATGTTTATGACACCTTTAAGTGGAGATTTCAGAAACAGGGCATAAAGGGCGTGCTTCTTTCAGAGGAAGAGTTTACACAGTTAACCATTGAACGATCTCAATCTCAAGTAACGGACCCTGATAATGGTGACACGTGGAACGTTCAGTTATTCAGATCCATTGATGACAGTGCTACTCTTGGATTCCCAGAAACTGCTGAAGCAGCTTTTAAAGCTGGGATTGTTAGAGGTGATGATGAGATGATAGATCGGAGCATTCAAGATGCATACATACATGCTATTCGGCGCGCAAAGGATTTCATCTATATTGAGAGTCAGTATCTCATAGGATCTGATTTTGATTGGAGCCAGGACGCTGCTCACGAGTGTTTACATACAATCCCAAATGAGCTTTCCTATAAAATTGTTAGCAAGATTCAAGCTAAGGAAAGGTTTGTTGTGTACGTTGTGATTCCGATGTGGCCAGAGGGTAAACCAAAAGGCAAAAAGGGGGTTGTTCAGGACATGTTGTACTTTTCAGAGGAGGACCATAGAGATGATGATGTGGGAAATACAGAAGATCGTCCTGACGACTATTTGTCATTCTTTTGCCTTGGCAAACGGGAGAAGAATGAACATGTGCCTCCAAAAAGACCAAACCAAGGTTCCCATTACCAGAAAGCCCAAGACGCCGGACGCTTCATGATTTATGTGCATTCCAAGATGATGATAGTTGATGATGAATACATAATTGTTGGATCTGCTAACATCAACGGTAGATCAATGGATGGTGATAGAGACACCGAGATTGCCATGGGAGCTTATCAACCTAACCATCTATCTATGGGGAATGGCTATGCAATGGGTCAGATCCATGGCTTTCGCATGTCGCTATGGTACGAGCACCTTGGCAACATTGAACAATGCTTCTTCGAACCTAAAAGTAAAGAATGCATTAACAAGGTGAACAAGGTTGCTCAAAAGAACTGGGAATCGTATTCTAAAGAATCATTAGACAGTGAACTTTCTGGCCATCTAATCCGCTACCCTTTTGACATTTCGGATGACGGAACACTCAAAAACCTCCCAGGATTCGAGTTCTTCCCGGACACTAATGCTCCTATTCCAGGTAAACTCAAGTCTACTACATTTTCCCGCTTCATTCCAAGCGAAGCAGAGTAA 2124 0.4294 MELYSSSRHCIGKACVPAKDILNGIEDEKWVKIVGEGRLPVADGDPKILVKLKFSAATQHENWSQGIKDPEFQGVPRTFFKQQVGCKVTLYQDAHVSDSFVPGVVLDGGVTYEPQRCWEDMFKAIKEAKHFIYIAGWSLYTEISLIRDPNRPQDGGHKTLGELLKEKAAENVRVVLLLWEDGVPIPVIGKFLSNFFGIMDTHDKETQRYFKGTNDIHCVLCSRDSDNKSSHHQKIVVVDAELPNGKQQQQPNKRRIVSFIGGIDLCNGRYDTPTHSLFGTLKGEHIDDFYQKCIPDATIEKGGPRQPWHDVHCKLEGPIAWDVYDTFKWRFQKQGIKGVLLSEEEFTQLTIERSQSQVTDPDNGDTWNVQLFRSIDDSATLGFPETAEAAFKAGIVRGDDEMIDRSIQDAYIHAIRRAKDFIYIESQYLIGSDFDWSQDAAHECLHTIPNELSYKIVSKIQAKERFVVYVVIPMWPEGKPKGKKGVVQDMLYFSEEDHRDDDVGNTEDRPDDYLSFFCLGKREKNEHVPPKRPNQGSHYQKAQDAGRFMIYVHSKMMIVDDEYIIVGSANINGRSMDGDRDTEIAMGAYQPNHLSMGNGYAMGQIHGFRMSLWYEHLGNIEQCFFEPKSKECINKVNKVAQKNWESYSKESLDSELSGHLIRYPFDISDDGTLKNLPGFEFFPDTNAPIPGKLKSTTFSRFIPSEAE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211515g00015 707 SUPERFAMILY Phospholipase D/nuclease 405 632 - -
Stsc211515g00015 707 Gene3D Endonuclease Chain A 376 595 - -
Stsc211515g00015 707 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 227 269 IPR001736 GO:0003824
Stsc211515g00015 707 SUPERFAMILY Phospholipase D/nuclease 58 333 - -
Stsc211515g00015 707 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 548 575 IPR001736 GO:0003824
Stsc211515g00015 707 SMART pld_4 548 575 IPR001736 GO:0003824
Stsc211515g00015 707 SMART pld_4 227 269 IPR001736 GO:0003824
Stsc211515g00015 707 PANTHER PHOSPHOLIPASE D 9 688 IPR015679 -
Stsc211515g00015 707 Pfam Phospholipase D C terminal 621 692 IPR024632 -
Stsc211515g00015 707 PIRSF PLD_plant 4 701 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Stsc211515g00015 707 Gene3D Endonuclease Chain A 108 363 - -
Stsc211515g00015 707 Pfam Phospholipase D Active site motif 549 575 IPR001736 GO:0003824
Stsc211515g00015 707 Pfam Phospholipase D Active site motif 230 269 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211515g00015 Stsc-Chr211515 79130 82164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211515g00015 11 691 Phospholipase D Gene Family (Wang group) AT1G52570 54.866 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211515g00015 K01115 - cit:102578017 755.747