Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211515g00014 ATGGAGGGAGTTCTGTTGCATGGAGACATGGATGCAACCATTTGTGAGGTTTACAACCTCAAAGCCGTTATTGACAATACATCGATTGTGCAAAGGCTAATGGGGAAAGTAATATCTATTGGAGTGTATGCAGCCGTTTATCTTGATAAATTGAAAATAGAAAGCAGACGAGTAAAAGACCCTTCTAACCCTGATATCAAAGAGTGTTTTTACATTAGATGTGCACATAAGACATCAAATATCATATTCACCATACAATGTGAAACATGGTATTCCAGTGGGAGAATTGTTCTTGGACAAGCACATGTGCCAGTTGAGGATGTCATAAATTGTGATCTAGTAGACAAAAGGGTTGAAATTGTGGATCATGCCAAAAAGCCAATACCTGGAGCTCCAATGATCCATGTGAAGCTACAATTCTTTGATGCTAAAAGGAATCCAAACTGGGGTCAAGGCATCAAGGATCCTAACTTTCCTGGAGTTCCTCGTACTTTCTTCTCACAGCAAAAGGGATGTAAGGTTTCTCTTTACCAAGATGCTCACGTCCTAGACAGTTTTGTCCCGGAAGTAGTCGTCAATAGAGGTGAGAAGTACAATCCTCAGAGATGTTGGGAGGAGATGTATGATGCAATCAATGAAGCAAAACACTTTATATACATCGCTGGCTGGTCTCTTTGCACTCAGGTTTCTTTGGTAAGAGATCTAAACAGGACACATCCTGGAAGAGGCGAAACACTCGGTCAGTTGCTCAAGAGAAAGGCAGAGGAAGATGGAGTTACGGTTGTATTGCTTCTTTGGAATGATATAACAGCGGTTTCGGTAATCGGAAACCTTGGAAAAATGGGTACTCATGATAAAGAAACCCAAAAGTATTTTAAGGGTAGTAAGGTGCATTGTGTTTTATGTACTCGTGATAATATTTTCCACACTCATCACCAAAAGATTGTGGTGGCGGATGCTAAGTTGCCAGAAGGAGAAAACGCAGATAAGAGAAGAATAGTGAGTTTCATTGGAGGTATTGATCTCTGTTGTGGAAGATATGATACTCAATCTCACTCTCTATTTAGTACACTAGCCACATATCACAAAAATGATTTTCATCAACCAAGTATCCATGGCGCTGACATCGAAAAAGGCGGTCCTAGAGAGCCATGGCATGACGTGCATTGTAAGCTTGAAGGGCCAGTTGCATGGGATGTTTATTCCACCTTTGTGCAGAGGTTTAAGAAACAGGGCATAGAGGGCTTGCTTCTTTCAGAGGAAAAGATTAAAGATTTCATCGTTTCGCCATCTCAAGTAATAGACCCTTATGATGGTGATACATGGAATGTTCAGTTATTCAGATCCATTGATAACAAAGCGACTATTGGTCTTCCGGAATCTGCTGAAGATGCTTTCAAATTTGGGCTTGTGAATGAGGAGAACAAGATGATAGATAGAAGCATTCAAGATGCATATATTCAAGCTATTAGGCGGGCGAAGAATTTCATCTATATTGAGAATCAGTATTTTATAGGAAGCGATTTCGATTGGAGTGTTGATGAAAAGAAAGAGCACCCTGATGCTGTGAATCTAATACCAAAGGAGCTTTCGCTTAAGATTGTTAGCAAGATCAAAGCCAAGGAAAGGTTTGTTGTGTATGTTGTTATTCCGATGTGGCCGGAGGGTGTCCCAAAGAGTGGAGATGTTCAGAGAATATTATACTTGCAAAGGAGGACCATAGAGATGATGTACAAGGACATTGCTCAAGCACTCAAGGAAGAAGGAATAGACAAAGATCCTCAGCAATATTTGGCATTATTCTGTCTTGGCAATCGAGAGGTGAAGAAGGATGGAGAATATGAGCCTGAACAAACACCAAGCGAAGATTCTGATTACTGGAAATCACAGGAGGACAGACGCTTCATGATTTATGTGCATTCAAAGATGATGATAGTTGATGACGAATACATAATCATTGGATCTGCCAACATCAATCAGAGATCAATGGACGGAGGAAGGGACACAGAAATCGCCATGGGAGCTTACCAACCATACCATTTGGCTACCAACTATGGTGGTGCGAGAGGCCAAATCCATGGCTTTCGCATGTCCCTATGGTATGAGCACCTCGGCAAACTTGACAAAGCCTTCCTCCACCCTGAAAGCAAAGAATGTATTAAGAAAGTGAACCAACTTTCTGGAGAGTATTTTAATGAATATGCTTGTGAGTCACCCATAGAAGACCTTCCTGGACACTTGCTTCATTATCCTATTAAAATTTCCCCAGACGGAATTGTCATGAATATCGACAAATTGGAGTTCTTCTCGGACACAAATGCTCATATTCTAGGCAACAATGGCTCTGATATAGTTACTCGTATCCCTCCGGACATGTTGTATGACATTGTTAAACCAACTCTCCATGTTCATCGACAAGTTAGTTCCACCGAGGTTGAACAAGTTCCCTTCAGCGCTACCTAA 2463 0.4117 MEGVLLHGDMDATICEVYNLKAVIDNTSIVQRLMGKVISIGVYAAVYLDKLKIESRRVKDPSNPDIKECFYIRCAHKTSNIIFTIQCETWYSSGRIVLGQAHVPVEDVINCDLVDKRVEIVDHAKKPIPGAPMIHVKLQFFDAKRNPNWGQGIKDPNFPGVPRTFFSQQKGCKVSLYQDAHVLDSFVPEVVVNRGEKYNPQRCWEEMYDAINEAKHFIYIAGWSLCTQVSLVRDLNRTHPGRGETLGQLLKRKAEEDGVTVVLLLWNDITAVSVIGNLGKMGTHDKETQKYFKGSKVHCVLCTRDNIFHTHHQKIVVADAKLPEGENADKRRIVSFIGGIDLCCGRYDTQSHSLFSTLATYHKNDFHQPSIHGADIEKGGPREPWHDVHCKLEGPVAWDVYSTFVQRFKKQGIEGLLLSEEKIKDFIVSPSQVIDPYDGDTWNVQLFRSIDNKATIGLPESAEDAFKFGLVNEENKMIDRSIQDAYIQAIRRAKNFIYIENQYFIGSDFDWSVDEKKEHPDAVNLIPKELSLKIVSKIKAKERFVVYVVIPMWPEGVPKSGDVQRILYLQRRTIEMMYKDIAQALKEEGIDKDPQQYLALFCLGNREVKKDGEYEPEQTPSEDSDYWKSQEDRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPYHLATNYGGARGQIHGFRMSLWYEHLGKLDKAFLHPESKECIKKVNQLSGEYFNEYACESPIEDLPGHLLHYPIKISPDGIVMNIDKLEFFSDTNAHILGNNGSDIVTRIPPDMLYDIVKPTLHVHRQVSSTEVEQVPFSAT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211515g00014 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 635 662 IPR001736 GO:0003824
Stsc211515g00014 820 SMART pld_4 635 662 IPR001736 GO:0003824
Stsc211515g00014 820 SMART pld_4 307 346 IPR001736 GO:0003824
Stsc211515g00014 820 PANTHER PHOSPHOLIPASE D 4 780 IPR015679 -
Stsc211515g00014 820 SUPERFAMILY Phospholipase D/nuclease 480 720 - -
Stsc211515g00014 820 Gene3D Endonuclease Chain A 190 424 - -
Stsc211515g00014 820 Pfam Phospholipase D Active site motif 310 346 IPR001736 GO:0003824
Stsc211515g00014 820 Pfam Phospholipase D Active site motif 636 662 IPR001736 GO:0003824
Stsc211515g00014 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 142 IPR035892 -
Stsc211515g00014 820 SUPERFAMILY Phospholipase D/nuclease 148 410 - -
Stsc211515g00014 820 Gene3D Endonuclease Chain A 441 680 - -
Stsc211515g00014 820 PIRSF PLD_plant 1 788 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Stsc211515g00014 820 Pfam Phospholipase D C terminal 708 779 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211515g00014 Stsc-Chr211515 66145 71386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211515g00014 5 779 Phospholipase D Gene Family (Wang group) AT3G15730 56.040 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211515g00014 K01115 - gmx:100784434 924.08