Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211514g00011 ATGGAAATGAAGGGGGAGAGTCACAAAGCGAAGGCGCTGAATCTGCTTCGAAGCAGAGTGTGTGACCCCAAATTCGCGTTCAAGGTTCTTTATGATTCTCCAGAGAGCAACTATAGCAAGCTTAAATTCATGATTTCCAGTTCTATCACTGAGGCTTGTAACAACTCCATTCTCCTTCTCGGTCCTCGCGGCTCCGAAAAGATTTCCGTGTTGGAGCTTGTCATTCGGGATTTGCTGGATGAATATCCCGACTCAATTTCAATGATCAGGTTAAGTGGAGTTCTACATAGTGATGACATCTCTGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAGTTGCTATTCTCAAAATCGGCATCGTTTGATGACAACTCCCAATTTATGGTGGCCATGCTAAAGGAATGTGGATTAGCACATAAAACAGTCATTTTTGTTTTGGATGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGTTACTTTACAGTCTCTTAGATGCAATGCAATCAGTAACATCACAGGCTGTTGTACTTGGCATTAGCTGTCGGCTGGATGCTGATCAGTTGTTGGAGAAAAGAGTACGTTCTCGGTTTTCACATAGAAAGCTGTTGTTTACACCACCTTCAATGGAAGACTCACAGAGATTGCTGGTGCACATGCTTACATTGCCAGTAGATTCAAGCTTCCCTCGTGATTATGCTATTGAATTTAATAGAAGGGTCCAAAATATCGTAGAAGACAAAAGGTTCAAAGAAACCTTCAATGCATATTTGAATTTTGACTCCTCTGTTAAGCATTTGCTAAAGTTTCTATTCTGTGCTATCTCTCATATGGATTCGAAGACTGGGTTTCTGTCCCATGAGAACTTCAAAACCGCATTTTCAAGTATTTATAGGCAACCAAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTTTACGTTTTGGTTTGCATGAAGAGGTTGGAAGTGAAAGAGAAAAGCTTCTGCAACTTCAATTCTGTGATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGACATCTGATTACTATGATCGAAATGTCTGCTTAAGGGCATTTGAACACCTTATAAGTCGGGAACTAATATGCTTCACGGACAATAGAGGGCACAGTTTGTCCGTTGAATATCGTCCTGTAAAGCTTTTAATCTCATCTGCTGAACTGAATCAGGGACTAAAAGCATATCATTCATGCCCCGCTATCCTTCAAAAGCTAATGGATCGTGAAGGCTAG 1266 0.4068 MEMKGESHKAKALNLLRSRVCDPKFAFKVLYDSPESNYSKLKFMISSSITEACNNSILLLGPRGSEKISVLELVIRDLLDEYPDSISMIRLSGVLHSDDISAFKEIARQLCMEHQLLFSKSASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFTPPSMEDSQRLLVHMLTLPVDSSFPRDYAIEFNRRVQNIVEDKRFKETFNAYLNFDSSVKHLLKFLFCAISHMDSKTGFLSHENFKTAFSSIYRQPKLECLRNCSILELYVLVCMKRLEVKEKSFCNFNSVMKEYKSIHDSFQTSDYYDRNVCLRAFEHLISRELICFTDNRGHSLSVEYRPVKLLISSAELNQGLKAYHSCPAILQKLMDREG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211514g00011 421 PIRSF ORC4 2 421 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Stsc211514g00011 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 251 IPR027417 -
Stsc211514g00011 421 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 7 420 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Stsc211514g00011 421 Gene3D - 34 209 IPR027417 -
Stsc211514g00011 421 FunFam Origin of replication complex subunit 4 35 209 - -
Stsc211514g00011 421 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 401 IPR032705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211514g00011 Stsc-Chr211514 50187 53546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211514g00011 3 418 Core DNA Replication Machinery Family AT2G01120 64.775 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211514g00011 K02606 - gmx:100800582 677.552