Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211510g00019 | ATGCATTCGAGTTCGAGTTCTGCTTCTGTTGGTACTGGCCGTCACCCCGTATACCGCGGGGTGAGGCGTAGAAGTAGTGGAAAATGGGTGTCGGAAATTCGGGAGCCGAAGAAGCCTAATAGAATTTGGTTAGGGACATTCCCTACTCCAGAAATGGCTGCGGTTGCATATGATGTAGCCGCTCTTGCCCTAAAAGGTAAGGACGCGGAGTTAAACTTTCCTAATTCGGCTTCTTCGCTCCCGGTTCCGGCTACCTTATCCCCACGTGACATTCAAGCGGCAGCGGCTAGTGCTGCCTCGGCTGCCGGGGCAGCAAAAGACGCTTTGAATGCTGAAGGATCAGGCTCAGGCTCAAGCCAAGGGAATATTAATAAAAATAATGATGCTAATAATGTTCCTTCTTCATCAATGGCACATGACTTTGTGGATGAGGATTTGATCTTTGACATGCCTAATGTTTTGGTGAACATGGCTGAAGGAATGCTTCTTAGCCCTCCTCCTTTTGACATTGGTGGTGGTGATGATGCTCCAGAAAACATGGATGAGCCAAGCCTCTGGAATTTCCCTTAA | 570 | 0.486 | MHSSSSSASVGTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGKDAELNFPNSASSLPVPATLSPRDIQAAAASAASAAGAAKDALNAEGSGSGSSQGNINKNNDANNVPSSSMAHDFVDEDLIFDMPNVLVNMAEGMLLSPPPFDIGGGDDAPENMDEPSLWNFP | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211510g00019 | 189 | CDD | AP2 | 18 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | SMART | rav1_2 | 17 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | ProSiteProfiles | AP2/ERF domain profile. | 17 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | FunFam | Ethylene-responsive transcription factor 2 | 16 | 75 | - | - | |
Stsc211510g00019 | 189 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Stsc211510g00019 | 189 | PRINTS | Ethylene responsive element binding protein signature | 56 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | PRINTS | Ethylene responsive element binding protein signature | 18 | 29 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | MobiDBLite | consensus disorder prediction | 112 | 136 | - | - | |
Stsc211510g00019 | 189 | Pfam | AP2 domain | 16 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | Gene3D | AP2/ERF domain | 17 | 75 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc211510g00019 | 189 | SUPERFAMILY | DNA-binding domain | 17 | 76 | IPR016177 | GO:0003677 | |
Stsc211510g00019 | 189 | MobiDBLite | consensus disorder prediction | 166 | 189 | - | - | |
Stsc211510g00019 | 189 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 13 | 187 | IPR045277 | GO:0003700 | |
Stsc211510g00019 | 189 | MobiDBLite | consensus disorder prediction | 109 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211510g00019 | Stsc-Chr211510 | 150922 | 151491 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211510g00019 | 13 | 189 | AP2-EREBP Transcription Factor Family | AT2G36450 | 61.905 | 1.91e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Stsc211510g00019 | AP2 | 2.1e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211510g00019 | - | - | pvu:PHAVU_007G222600g | 238.424 |