Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211510g00017 ATGGAGCAAACAAAGAAGAATCATCATCATCATGATAATAGCAAGCAACAATTCTTCTTACACGAGCTTCTCAGCCAAGATCAAGAGCCCTTCCTTCTCACCAATTACATCTCCCACAAGCAAAACCAACTCACCATCCATTCTTCGCACAAACCACGAACCCTAAAAACCTCAACTTTATTCCCAATTCATCACCTCTGCAAGAACGCGCTCTGCTTCAATTCCTCTTCTTCTTCAGCTCCAACAACCACACCTGACTTCACCAAATCCCCGCTCTTCAGAATCAGTCCGTGCTCTGCACGTGCCTCTTCTTCGCCGCCGAACGCGATTTTCCTCCATGTTCCGGCGAGAACCGCTTCCATTCTTCTAGAAGCTGCGATTCGGATTCAGAATTACTCCAATTCCAGAAACAACAACAATAATAATGGAGGATTTGGTTTCTTCGGTTCCTTCTTCAGGAGATTCACGCAAAGGGGAAGAAGAAACAAAAGACAAATTCAACAGGATGATAATAACAATGTGAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGGTGAAGGATCTCTTGAAATTGGAGCTAGATTCGGGAGGAAGAACAATGGAAGAAGAAGATGAGAAGAGGAAGGAGGAGAAGGGGAATGTTATGGTGGACACTAGTGAAGTAGGGTTTAGGTGTTCCTGCAGTGAAGAAAGGGTGTGTTCTTCTTCGAGTAATGCTGGTTCTTGTTGTTTTGTTGTTGATGATGATAATGATTTTTTCTGTGAGAGCCCTTTCCGTTTTGTTCTCCAACGGAGCCCTTCCGCCACCTCCTCCTCCGGCCGCCGTACGCCGGAGTTCTCCTCGCCGGCATCGTCTCCGAATCACCACCGAACAGAGGACAAAGAAGATAATAATAATAAAAATAATGGAGATGATAGCATCAACAAATTCCAATCAGGGAAGCAAGAAGAAGAAGAGGAGGAAGAAGATAAAGAACAATGTAGTCCTGTATCAGTTTTAGACCCACCATTTGAGGATGATGATGATGTTCATGAAAGCAATGATGATGATGGGGAAGGTTTTGATTTGGATTGTAGCTACGCCAATGTACAAAGAACAAAGCAACAACTATTATACCGGCTAAGTAGATTTGAGAAATTGGCGGAGTTAGACCCGTTGGAACTTGAACAAAGAATGTTAGATCAAGAAAACGAGGATATTCGTGAAGATGGCGATAGCGAATCGCGTGAAGAAGACGACTTGAGAGAAATAGTTTATGCAATCCTCAACCAATCAAGCAGATGGCGAGTTCCAGAGGATCTCAAGAGGCTAGTTTATGATCTCATGATGGAGGAAGAAGAGATCGCGGAACTCGATTCCCCGGAAGACAAGGAGATGGTGATAAAAAGGGTTTGTAAGAGGTTGGAGCTATGGAAGGAAGTGGAATCCAACACCATTGATATGATGATAGATGAGGATTTCTCAAGAGGGGAAATTGGGTGGAAGAAAAATTCACAGCAGCTAAGAGATTTGGCTGGAGAACTTGAGCTTGCCATCTTTGCCCTTTTAGTGGAGGAATTTTCCGAGGAACTTGCTATTTAA 1587 0.4348 MEQTKKNHHHHDNSKQQFFLHELLSQDQEPFLLTNYISHKQNQLTIHSSHKPRTLKTSTLFPIHHLCKNALCFNSSSSSAPTTTPDFTKSPLFRISPCSARASSSPPNAIFLHVPARTASILLEAAIRIQNYSNSRNNNNNNGGFGFFGSFFRRFTQRGRRNKRQIQQDDNNNVKWKKKKKKKKQKVKDLLKLELDSGGRTMEEEDEKRKEEKGNVMVDTSEVGFRCSCSEERVCSSSSNAGSCCFVVDDDNDFFCESPFRFVLQRSPSATSSSGRRTPEFSSPASSPNHHRTEDKEDNNNKNNGDDSINKFQSGKQEEEEEEEDKEQCSPVSVLDPPFEDDDDVHESNDDDGEGFDLDCSYANVQRTKQQLLYRLSRFEKLAELDPLELEQRMLDQENEDIREDGDSESREEDDLREIVYAILNQSSRWRVPEDLKRLVYDLMMEEEEIAELDSPEDKEMVIKRVCKRLELWKEVESNTIDMMIDEDFSRGEIGWKKNSQQLRDLAGELELAIFALLVEEFSEELAI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 337 357 - -
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 159 215 - -
Stsc211510g00017 528 PANTHER OS04G0572500 PROTEIN 20 526 - -
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 188 215 - -
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 289 304 - -
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 266 357 - -
Stsc211510g00017 528 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211510g00017 Stsc-Chr211510 133389 137730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211510g00017 20 527 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 30.713 7.92e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211510g00017 - - ahf:112728865 674.085