Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211510g00014 ATGCAAAGTGATTCTGCATCTTCATCATGTAAAGAAGTTGTTCAATCACAGCCTATGGAACCTGCCCAAGTAGAAAAACAAATATCTGAACCTTCTCCTTCTGTTGATAGCACTAACGAGTCTTCCCCTAAAAAACTAGGAAACAAAGCATCTGTGCCAAAGAATGGGCGGAAAGGTAGGCTGCAATCTTCCTCTTCTACCTCAGCAAATGGCAATAGAGTGAGCAAACAGACGCGAAACGCCCCTCGAACAGTCAAAATGGTCATCAAGAACAAGGGTTTGGGAAAGAAGAAACTAAAGCAGGGTTCAGGTTCTGCTTCATGTGATCCCAGATCCAATGATGTAAATAACAAGCCAGCTCCATTGGTGTGTGAGAGATGTTTGTGTGCTATAGAAAACAAAGCTAAAGGAAACAGCCAAGATATCGAGTCTATCAGGCCTGGAGATGGAGTAAACTCGAGTAGTGCGCGGTCAGGCTTGGTTTCGACTAGCTGCAATAGTGGCAGAGAAATTACAGAGGTGAAAAAGAATACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGCTCAAAGAGTAGTCAAGGTGATTACAGCAGTAGTACCAGTACCAGTGATGAGAGCAATGTCAGTGGCTCTACTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCGTCATGGAGTCTTGGGATTGAGACATTTCAATCTTTTGAAGAAACTTGGCTGTGGAGACATTGGGACTGTTTATCTTGCTGAACTGATTGGCACAAATTGCTTGTTTGCTATTAAGGTTATGGACAATGAATTCTTGGCAAGAAGGAAGAAGATGCCTCGGGCTCAAACCGAAAGAGAAATTTTAAGGATACTGGATCATCCTTTTCTTCCAACAATGTATGCACAGTTTACATCAGATAATCTGGCATGTCTGGTCATGGAGTATTGTCCTGGTGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGAAGTTTCTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAATACTTGCACATGCTTGGAATTGTTTACCGTGATTTGAAACCCGAAAACATTCTAGTTAGAGAAGATGGCCACATTATGCTGACAGATTTTGATCTCTCACTGAGGTGTGATGTTAGCCCAACGCTTCTAAAACAATCTTCAGACATGGATCCTGCCAAGGTTTCCGGTCCATGTGTACAATCGAACTGCATCGAGCCGTTCTGCATCGAACCGGTGTGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTCCTGCTGCAAAGGCAAGGAAACAGAAAGCTGAGCTTGCTGCCCAGATCAGATCACTACCACAGCTCGTGGCCGAGCCGACCGACGCAAGATCGAATTCATTTGTAGGCACTCATGAATACTTAGCACCAGAGATCATCAAAGGGGAAGGACATGGAGCTGCAGAACCTGAGAACCGTTTGGGTACTGAGAAAGGTGCTGCTGAGATTAAACAGCATCCTTTCTTTGAAGGTCTTAATTGGGCCTTAATACGTTGTGCTACACCACCAGAAGTACCAGATTTATGTGAGTTTGAGTTTTCAGAGATTACATCACAATCACAGTCACATGGTAATAAGGGTGGGAAGTATTTAGAGTGTAAAACAACAGGGGAACAAGTGGAGTTTGAATTGTTTTGA 1722 0.4361 MQSDSASSSCKEVVQSQPMEPAQVEKQISEPSPSVDSTNESSPKKLGNKASVPKNGRKGRLQSSSSTSANGNRVSKQTRNAPRTVKMVIKNKGLGKKKLKQGSGSASCDPRSNDVNNKPAPLVCERCLCAIENKAKGNSQDIESIRPGDGVNSSSARSGLVSTSCNSGREITEVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSTCGNRPHMSKDVRWEAIRHAQMRHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLACLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKQSSDMDPAKVSGPCVQSNCIEPFCIEPVCQVPCFSPRFLPPAAKARKQKAELAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAEPENRLGTEKGAAEIKQHPFFEGLNWALIRCATPPEVPDLCEFEFSEITSQSQSHGNKGGKYLECKTTGEQVEFELF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211510g00014 573 FunFam serine/threonine-protein kinase D6PK-like 328 395 - -
Stsc211510g00014 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Stsc211510g00014 573 SUPERFAMILY Protein kinase-like (PK-like) 220 536 IPR011009 -
Stsc211510g00014 573 PANTHER FLIPPASE KINASE 1-RELATED 497 542 - -
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 140 171 - -
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 1 48 - -
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 1 116 - -
Stsc211510g00014 573 Gene3D Transferase(Phosphotransferase) domain 1 339 496 - -
Stsc211510g00014 573 Pfam Protein kinase domain 245 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211510g00014 573 ProSiteProfiles Protein kinase domain profile. 244 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211510g00014 573 SMART serkin_6 244 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 57 84 - -
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 183 217 - -
Stsc211510g00014 573 MobiDBLite consensus disorder prediction 140 218 - -
Stsc211510g00014 573 Gene3D Phosphorylase Kinase; domain 1 227 338 - -
Stsc211510g00014 573 FunFam Serine/threonine-protein kinase D6PK-like 242 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211510g00014 Stsc-Chr211510 113925 116166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211510g00014 482 573 AGC Kinase Gene Family AT3G52890 54.348 1.51e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc211510g00014 Pkinase 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211510g00014 - - gmx:100813470 751.895