Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211510g00003 ATGGCGGAAGAGCATCGCTGCCAAGCTCCCGAAGGTCACAGGCTCTGCGTCAACAACTGCGGCTTCTTCGGTAGCCCAGCCACCATGAATCTCTGCTCCAAATGCTTCAGAGAACAAGAATCCGCAAAATCCACGATCGAAAACGCTCTCTCCACCGCCACCGCCACCGCAACCGCAGCCTCCTCCGTCGCTGCCGTAGAAGCGGTCTTTCCATCTCAATCTCCGGCACCGTCAACGTCGTCTTCTCCGGCGCCGATTCCAGCCGTCGTCGAAACCTCTGTTCCTCAACCGGTTGAGCTAGAAGCTTCGAGCTCCGTAACCGTTTCCGTAACGGTTACCTCGAATCCCGGAGCTCCGGTTCAGGCGAACCGGTGCGCAACGTGCCGTAAACGCGTCGGGTTGACCGGGTTCAAGTGCAGGTGCGGTGTCACGTTCTGTGGGGCCCACAGATACCCGGAGAAACACGCGTGCAGCTTCGATTTCAAGACGGTGGGGAGAGAGGAGATAGCACGTGCCAACCCCGTGATCAAGGCGGAGAAACTCGATAGGATCTGA 555 0.5856 MAEEHRCQAPEGHRLCVNNCGFFGSPATMNLCSKCFREQESAKSTIENALSTATATATAASSVAAVEAVFPSQSPAPSTSSSPAPIPAVVETSVPQPVELEASSSVTVSVTVTSNPGAPVQANRCATCRKRVGLTGFKCRCGVTFCGAHRYPEKHACSFDFKTVGREEIARANPVIKAEKLDRI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211510g00003 184 Gene3D - 1 66 - -
Stsc211510g00003 184 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Stsc211510g00003 184 FunFam Zinc finger AN1-type containing 6 100 180 - -
Stsc211510g00003 184 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Stsc211510g00003 184 SUPERFAMILY AN1-like Zinc finger 118 179 IPR035896 -
Stsc211510g00003 184 Gene3D - 101 180 IPR035896 -
Stsc211510g00003 184 SMART AN1_Zf_4 125 162 IPR000058 GO:0008270
Stsc211510g00003 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 45 - -
Stsc211510g00003 184 Pfam AN1-like Zinc finger 125 161 IPR000058 GO:0008270
Stsc211510g00003 184 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Stsc211510g00003 184 ProSiteProfiles Zinc finger AN1-type profile. 119 165 IPR000058 GO:0008270
Stsc211510g00003 184 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211510g00003 Stsc-Chr211510 23718 25591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211510g00003 1 184 C2H2 Transcription Factor Family AT3G52800 47.283 9.65e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211510g00003 - - gmx:100813749 224.172