Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211509g00016 ATGTCTAGTTCATCGGAATACTCGGAATTTTCCGGCCAGAAGGCGGCGAGGTCGCCGGAAAAATCTAGCTTCTCTCAGACTTGCAGTTTGTTGAGTCAATACATCAAAGAAAAGGGAAGCTTTGGGGATCTTACACTCGGCATCACATGCAATTCCGAACCAACTGGGTCACCTGAAACTTCTTGTCAGTCTGCAACAACCATGAACCTATTTCCTACCAAAGAAAACAACGTTGTACCAAAGAACCTCACATTCACAGGCACTGCCATGGATTTGCTCTCTCCACAACCTGCTTTTAATTCCAGTGCAGTTAAGTCTGTGAGCAAGGCCCCAAAAACTGCACAATTGACAATCTTCTATAATGGTCAAGTTGTTGTGTTCGACGATTGTCCGGCCGAGAAGGCGAACGAGCTCATGGCTTTCGCCAACAAAGGACTCTCTTCTCAAAGCCAGAACAGCTCTGTCTACACCTACACTCAGAGCCAGCCTTCATTTCCTCCTAATTTGGCCAGAACATCGGCTGCTGATTCGACGGTTCAAGCCTTTCCCAAGGTGAATATCGTCGCAAGTGCCGGTACCAATTCGATCCACGAGCACTCCAAACCGCAGTCCAGACCTGTTGTTTGTGATCTACCGATTGCGAGGAAGGCTTCCCTTCATCGGTTCCTGGAGAAGAGAAAGGATAGAATTGCATCAAAGGGTCCATATCAAGCAGCAAATCCAATTAGGAGTGCTAACAAGCCAGCTGAATCCATGTCATGGCTTGAATTGGGTGCTAAATCTCAAGAATGA 792 0.471 MSSSSEYSEFSGQKAARSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGITCNSEPTGSPETSCQSATTMNLFPTKENNVVPKNLTFTGTAMDLLSPQPAFNSSAVKSVSKAPKTAQLTIFYNGQVVVFDDCPAEKANELMAFANKGLSSQSQNSSVYTYTQSQPSFPPNLARTSAADSTVQAFPKVNIVASAGTNSIHEHSKPQSRPVVCDLPIARKASLHRFLEKRKDRIASKGPYQAANPIRSANKPAESMSWLELGAKSQE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211509g00016 263 ProSiteProfiles Tify domain profile. 109 144 IPR010399 -
Stsc211509g00016 263 SMART tify_2 109 144 IPR010399 -
Stsc211509g00016 263 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 246 IPR040390 -
Stsc211509g00016 263 Pfam tify domain 111 143 IPR010399 -
Stsc211509g00016 263 MobiDBLite consensus disorder prediction 230 252 - -
Stsc211509g00016 263 MobiDBLite consensus disorder prediction 1 24 - -
Stsc211509g00016 263 Pfam Jas motif 212 237 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211509g00016 Stsc-Chr211509 111969 114482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211509g00016 1 260 Tify Gene Family AT1G19180 39.051 5.38e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc211509g00016 tify 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211509g00016 K13464 - gmx:100801449 343.584