Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211509g00007 ATGGCCTTAGCCATTTCCTCCACTGCACTTTCAAGCCTTCCAAACAGGGAGATACGGCAAAAGATTGTTCATCATGAAAGAACAAGGACGGTGTTGTTGAAAAGAACAACTGTAACAAATGCAACAAAAGGAGTGTCAAGTGTGTGTGAACCACTTCCTCCAGATAGACCATTGTGGTTCCCTGGTAGTTCCCCTCCTCAGTGGCTTGATGGCAGTCTTCCTGGTGATTTTGGCTTTGACCCTCTTGGATTAGGGTCGGATCCAGAGTTGCTGAAATGGTTTGCACAGGCAGAACTAATGCATGCAAGATGGGCAATGCTTGGTGTCTCAGGGATCCTCATTCCAGAGCTTCTTCAAAAAATGGGATTCCTTCAGGATTTCTCTTGGTACGACGCCCCTACAAGGGAGTATTTTGCGGACCCCACAACCCTCTTTGTTGTCCAAATGGCTTTGATGGGCTGGGTTGAGGGTAGGCGATGGGCCGACATGCTCAATCCGGGCTCTGTTGACATTGACCTCAAGCTTCCACACATAACCAAGCCCAAGCCCGATGTTGGGTACCCCGGTGGGTTTTGGTTTGACCCAATGATGTGGGGGAGAGGCTCCCCTGAGCCCGTTATGGTGCTTAGGACTAAGGAGATTAAGAACGGTAGGCTTGCCATGCTGGCATTTGTTGGGTTTTGGTTTCAGGCTATTTATACTGGGGAAGGCCCAATTGATAACTTGATGGCCCATCTCGCTGATCCAGGTCACTGCAACATTTTCTCGAGCATTACCCCATCCTATAATTATGCTTCCTGCGGAAAGTTCCCTCTTGTTTTTAGTGACTCAGAGCTTGATCGGGCGGGTCCGGTTCGTGTTATGTATAACCTGGAAGGGGAGATGATATAG 891 0.4893 MALAISSTALSSLPNREIRQKIVHHERTRTVLLKRTTVTNATKGVSSVCEPLPPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLQKMGFLQDFSWYDAPTREYFADPTTLFVVQMALMGWVEGRRWADMLNPGSVDIDLKLPHITKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHLADPGHCNIFSSITPSYNYASCGKFPLVFSDSELDRAGPVRVMYNLEGEMI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211509g00007 296 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 259 IPR001344 GO:0009765|GO:0016020
Stsc211509g00007 296 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
Stsc211509g00007 296 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Stsc211509g00007 296 SUPERFAMILY Chlorophyll a-b binding protein 55 260 - -
Stsc211509g00007 296 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211509g00007 Stsc-Chr211509 37600 41400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211509g00007 54 260 Chloroplast and Mitochondria Gene Families AT3G61470 67.633 1.15e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211509g00007 K08908 - gmx:100812066 466.077