Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211508g00014 ATGATGGAGAGAGTCGCGGAGCCGAAGGTGCTTCCTAGAACAATGCCTGTGTTGGTTGAGGTTTCTAATGCTGCACACAAGGGGACAATTAGTGAAGCTAATCAGAGACTAAATGGGAACGAGTTCTCGAGTTCGCGTGGGATTTCGAAAGCAAGGGACAGCCCTGTGACTCGTTTGGCATCCATCAGAGAAGTTGCTCAATTATCAAATGCAAGAGTTGTTCAAGAACCAATCTCTCCTGCACCTACAACAACATTGAAAGGAAAGGTCTCTTTGCCAGAACCAGAAGAACTTAAGGCATCTTCTTTGGAAACTGCGGCGAGTTCATTCGCCGGTGCTAGTCACCCCCCGGAACCAGTTGATACTGATCTTATGAGAACTGTTTATGTGCCAATTGGTCAGGCCAAATCCGAGGCTGCAAGCTTAACTAAAAACATGTCCTTGCAGGGTCCTTTCCTAGAAGATCTAACAATTTGTGTTCCTACCAAGAAACCAAGCCTGAGTGTTCTTTCTCCTGCAGAAAGTATGGTTGAAGAATCAAACAGCATGGAGAACTTGTCCTCGCCTCAGAATGCCGAGAGCTCTATCCCTCCCCCGGATTCTGAGGAGAAAGAATGTGTTTGGGATTCTTCTTTGCCTCCAACTCCAAGTGGTACTGTTAGTCCACATAGTAGTATTGATAGTTCTAGTGTTGTAAGAGCAATGAGCATCGCGAATAGTTGCGCGAGTACTTACCGGAGTGATGCATTCACAAGCGATGGCATGATTAGTTTAGACAGGAATTGTGACAGTACTAAGGGAAGTGTGAGTGTAAGAGGAGAGTCCCTAGAGAGTGCGAAAACCAGCCCGAGTCGAGTGAGTGATAGCAGTGGCCTAAGTGATGACAGCAGTTGGAGTAACATCACAGGTGGTGCCAATAAGCCTCACAAAGGAAATGATCCGAGGTGGAACGCTATACTCGCTATCCGAGCTCGCGATGGAATCTTGGGAATGAGTCATTTTAGGTTGCTAAAAAGGCTTGGTTGTGGTGACATTGGAAGTGTGTATCTCTCGGAGCTGAGCGCGACTCGGTGCTATTTCGCGATGAAGGTTATGGACAAGGCATCATTAGAGAGCAGAAAGAAGCTGAACAGGGCACAGACAGAAAGGGAGATACTGCAGCTGCTGGACCATCCGTTCCTACCAACTTTATATACACATTTCGAGACCGATAGATTCTCGTGTTTGGTAATGGAATACTGTCCGGGGGGCGATCTACACACTTTAAGACAACGCCAACCGGGGAAACATTTCTCGGAGTATGCTGCACGATTTTATGCTGCTGAGGTTCTCTTGGCACTTGAGTATCTTCACATGCTTGGAGTAGTGTACCGTGACCTTAAACCAGAAAACGTGCTGGTCCGCGACGATGGCCACATTATGCTCTCAGACTTTGATCTTTCCCTTAGATGTGCTGTTTCCCCTACACTTATCAGAACTTCTCACGACGGCGACCCTTCAAAACGTGCCGGTGGTGGCGCATTCTGTGTCCAGCCGGCATGTATTGAGCCTACTTCAGTATGCATTCAACCTTCTTGTTTCATGCCTCGGCTCTTTCCACAGAAAAGCAAGAAATCAAGGAAGCCTAGAGCTGATCCGGGGCTTCCTGCCAACACACTTCCAGAGCTTGTTGCCGAGCCTACTCAAGCTCGGTCCATGTCCTTCGTAGGCACTCACGAATACCTCGCCCCCGAAATCATCAAAGGAGAAGGCCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATTTTCTTGCATGAGCTGTTATATGGCAAGACACCTTTCAAAGGCTCAGGAAACCGTGCTACATTGTTCAATGTGGTAGGTCAGCAGCTCAAGTTCCCCGAATCGCCGGCCACTAGCTATGCAAGCCGGGATCTTATCCGTGGCTTGCTGGTCAAGGAACCACAGCACCGGCTCGGGGTGAAGAGGGGTGCTACCGAGATCAAGCAGCACCCCTTCTTTGAAGGTGTGAATTGGGCGTTGATTAGGTGTAGCACGCCGCCGGAGGTGCCAAGACCCGTGGAAGCCGAGCTACCAGCAACAAAGATTGAAGCAGTTAAAAATACAGTTGGGGTTGGCAACAATAGTAAGAGGATGGTAAGTAATAACAGTAGTAGTAATAGTAATAATGATAATAAGAATAATGAGATGAAATCTGGGGGTAAATATCTTGATTTTGAGTTCTTTTAG 2232 0.4772 MMERVAEPKVLPRTMPVLVEVSNAAHKGTISEANQRLNGNEFSSSRGISKARDSPVTRLASIREVAQLSNARVVQEPISPAPTTTLKGKVSLPEPEELKASSLETAASSFAGASHPPEPVDTDLMRTVYVPIGQAKSEAASLTKNMSLQGPFLEDLTICVPTKKPSLSVLSPAESMVEESNSMENLSSPQNAESSIPPPDSEEKECVWDSSLPPTPSGTVSPHSSIDSSSVVRAMSIANSCASTYRSDAFTSDGMISLDRNCDSTKGSVSVRGESLESAKTSPSRVSDSSGLSDDSSWSNITGGANKPHKGNDPRWNAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLESRKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSHDGDPSKRAGGGAFCVQPACIEPTSVCIQPSCFMPRLFPQKSKKSRKPRADPGLPANTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEAELPATKIEAVKNTVGVGNNSKRMVSNNSSSNSNNDNKNNEMKSGGKYLDFEFF 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 261 310 - -
Stsc211508g00014 743 Gene3D Transferase(Phosphotransferase) domain 1 414 482 - -
Stsc211508g00014 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Stsc211508g00014 743 FunFam serine/threonine-protein kinase D6PK-like 563 686 - -
Stsc211508g00014 743 PANTHER FLIPPASE KINASE 1-RELATED 108 694 - -
Stsc211508g00014 743 Gene3D Transferase(Phosphotransferase) domain 1 563 687 - -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 261 306 - -
Stsc211508g00014 743 FunFam Serine/threonine-protein kinase D6PK-like 332 417 - -
Stsc211508g00014 743 SUPERFAMILY Protein kinase-like (PK-like) 317 694 IPR011009 -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 705 731 - -
Stsc211508g00014 743 CDD STKc_phototropin_like 332 691 - -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 173 197 - -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 168 226 - -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 705 733 - -
Stsc211508g00014 743 FunFam serine/threonine-protein kinase D6PK-like 418 485 - -
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 212 226 - -
Stsc211508g00014 743 SMART serkin_6 334 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211508g00014 743 MobiDBLite consensus disorder prediction 79 102 - -
Stsc211508g00014 743 Gene3D Phosphorylase Kinase; domain 1 332 413 - -
Stsc211508g00014 743 ProSiteProfiles Protein kinase domain profile. 334 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211508g00014 743 Pfam Protein kinase domain 565 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211508g00014 743 Pfam Protein kinase domain 335 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211508g00014 Stsc-Chr211508 104926 107478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211508g00014 2 743 AGC Kinase Gene Family AT2G44830 64.923 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc211508g00014 Pkinase 3.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211508g00014 - - gmx:100800019 1147.11