Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211507g00007 ATGGAGATCATATCTAGAGGTGATTTGAAGGAGATGCTTTATGCTTGTGCAAAATCGATGGCAGAGAACGATATGGAGACTACTGACTGGCTGATTTCTGAGCTGCGTAAAATGGTTTCGATCTCGGGTGACCCTCTGCAACGATTGGGAGCATACATATTGGAGTCTCTTGTTGCAAGGGTGGCTTCCACAGGAAGCAAAATCTATAAGGCCTTAAAATGCAGCGAGCCGACAGGTAACGAACTGCTTTCTTACATGCATGTACTTTATGAAATATGTCCATACTTCAAGTTCGGGTATATGTCGGCGAATGGAGCAATCGCCGAAGCTATGAAGGAAGAAAGCCGAGTTCACATAATTGATTTTCAGATTAGCCAGGGAACTCAGTGGGTAAGCCTAATGCAGGCTCTTGCTCGCCGACCGGGAGGACCTCCTTATATCAGAATTACAGCTGTTGATGACTCCTTTTCGGCTTTTGCCCGGGGAGGGGGACTCGACATTGTGGGAAAAAGGCTATCAGCACTTGCACAATCTTGTAATGTACCTTTTGAGTTCCATGCTGTCAGAGTTCCTGCTTCTGAGGTGCAACTAGAAGATCTTGAACTTCGAACTAACGAAGCTGTGGCAGTGAATTTCGCCATTATGCTGCACCATGTTCCGGATGAAAGTGTAACCATTCATAATCCACGCGACCGGTTGTTGAGATTGGCGAAGCACTTGTCTCCCAAGGTAGTGACTCTAGTTGAGCAAGAGTTTAGTACCAATAATGCTCGATTCTTGCCACGTTTCGTGGAGACATTGAACTACTACTTGGCCATTTTCGAATCGATTGATGTTGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTTGAGCAGCACTGCTTAGCTCGAGAAATTGTCAACTTAGTAGCATGTGAAGGTGCAGAAAGAGTGGAACGGCATGAGCTTCTGAACAAGTGGAGGCGGCGTTTCGCCGCGGCTGGGTTTACGCCTTATCCGCTGAGCTCCTTTGTTAATGCTTCAATCAAGACCCTTTTGGAGAGCTACCCTGGACATTACACTCTAGAAGAGAGAGATGGAACACTTTATCTTGGTTGGATGAATCAGGAAGGAGATGCAAAGAGGCATACAACTGAGCCAAACAACTCTCCGAGGCCCAAATATTCTAGGTTGCAGCAGCAGCAGCAAGACTCAAGTCGTGAGCATAGTGGCAGTGGTGGTTCACTGGGGCTGGTGATGGAGGCGGTAACACTGGGCAAGGAAGATAATGATATAAGGAAGGTAAACTAG 1293 0.4687 MEIISRGDLKEMLYACAKSMAENDMETTDWLISELRKMVSISGDPLQRLGAYILESLVARVASTGSKIYKALKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEESRVHIIDFQISQGTQWVSLMQALARRPGGPPYIRITAVDDSFSAFARGGGLDIVGKRLSALAQSCNVPFEFHAVRVPASEVQLEDLELRTNEAVAVNFAIMLHHVPDESVTIHNPRDRLLRLAKHLSPKVVTLVEQEFSTNNARFLPRFVETLNYYLAIFESIDVVLPREHKERINVEQHCLAREIVNLVACEGAERVERHELLNKWRRRFAAAGFTPYPLSSFVNASIKTLLESYPGHYTLEERDGTLYLGWMNQEGDAKRHTTEPNNSPRPKYSRLQQQQQDSSREHSGSGGSLGLVMEAVTLGKEDNDIRKVN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211507g00007 430 Pfam GRAS domain family 9 370 IPR005202 -
Stsc211507g00007 430 ProSiteProfiles GRAS family profile. 1 379 IPR005202 -
Stsc211507g00007 430 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 367 IPR005202 -
Stsc211507g00007 430 MobiDBLite consensus disorder prediction 374 416 - -
Stsc211507g00007 430 MobiDBLite consensus disorder prediction 383 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211507g00007 Stsc-Chr211507 28107 30178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211507g00007 1 370 GRAS Transcription Factor Family AT1G50600 71.351 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211507g00007 GRAS 2.6e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211507g00007 - - gmx:100805672 632.484