Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211507g00006 ATGGAGCTTGGAAGTGCTGATATTACTCCTGTAGTTAAGCCCATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGGTACCGTTGGCGTAAGTATGGGCAGAAGGTGGTCAGAGGCAATCCAAATCCTAGGAGTTATTATAAATGCACAAATGCTGGTTGCCCTGTTAGAAAGCATGTGGAGCGAGCATCTCATGATCCAAAAGCAGTAATAACCACATATGAAGGTAAGCACAACCATGATGTACCAACTGCAAAGAATAGTAGCCATGACATGGCAGGACAAGCTGCATCCATTGGACAAGCAAGAATTAGGTCAGAAGAAAGTGATACGATTAGCCTTGATCTAGGGATGGCCATTAACCAAGGTGCTGAAAATGGCTCAAACAGGCAAGGGAGACTGCCACTTTCTGAATTTGGAGGCAGTCAAACTCACACAAACGATTCCAATTTCAAGTTTGTCCATGCTGCCTCAGCTCCAGTATACTATGGTGTTCTAAATAACGGCTCCATTCCATATGGTTCTAGAGAAAATCTGAGTGATAGTACATCTTTAAACCACTCTACTTATCCCTGCCCAAAGAACATGGGAAGAATACTAACGGGTCCCTAG 636 0.4418 MELGSADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKNSSHDMAGQAASIGQARIRSEESDTISLDLGMAINQGAENGSNRQGRLPLSEFGGSQTHTNDSNFKFVHAASAPVYYGVLNNGSIPYGSRENLSDSTSLNHSTYPCPKNMGRILTGP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211507g00006 211 ProSiteProfiles WRKY domain profile. 26 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211507g00006 211 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 126 IPR044810 GO:0003700
Stsc211507g00006 211 SUPERFAMILY WRKY DNA-binding domain 23 91 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211507g00006 211 MobiDBLite consensus disorder prediction 131 151 - -
Stsc211507g00006 211 FunFam WRKY transcription factor 33 18 84 - -
Stsc211507g00006 211 SMART WRKY_cls 31 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211507g00006 211 Pfam WRKY DNA -binding domain 32 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211507g00006 211 Gene3D WRKY domain 16 92 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211507g00006 Stsc-Chr211507 23896 26901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211507g00006 4 211 WRKY Transcription Factor Family AT4G26640 61.682 7.01e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211507g00006 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211507g00006 - - adu:107464084 405.601