Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211505g00007 ATGGACACTCCCGACAGGGCCACCGCCAACAACCTCAACCCCCCCAAATTTGAGGATTCACCAGTCTTTAACTTTCTCAATAGTCTGTCTCCTATAAAGCCAGTTAAATCTGTTCACATTACCCAGACCTTCAGTTCAATTAGCTTTTCATCCCCTCCATCAGTTTTCACATCACCCCATGTCAACCCTAACAAGGAATCCAGATTCCTGAGGAGGCATAACCTTTTGGACACATCAAAGCCAAAGGTTACATCTGAGGATGAAAATCAAATTGGATCAGGTGAAGAGGCTCTTACAGATTCAACTCATGCATGTAATAACTCAAGGGAGTTAGACAAAAAATCGGGTAAAGGAACTTCCATAGGAGATGCCTCAATTGAGCCAGCCAATGAACATGCAAAGTTCTCAATTGAGCTGCCACAGACCTTAAAATATGACTCTGGTAGCCCTGGATATGATCCTATACTTTGTGGTGATGAGGCAGCCACAGGTGTTGCCGGCAGTCATGAAGCCTCTAAAAAGGATTCGGTGGAGGGCGAACTGCATTTTCACGGAATATGTCAGACTCAGCAGAAAATTGATATCACAGAGAGTGATTGGGATAATTTAATTAATAATGCATCTGATATGTTAATTTTCAGTTCACCAAATGTGTCAGAAGCTTTTAAGGATCTAATGAATAAACAATTGGACCCTTCTGGACGGCTTAGCAATTTTATGACCACATTGCCAGAATCGTCAACCAACAACAGTCGTATAATGCACATAGTAAATCAGGTTGCTTCTGGATCAGGACATGAAAATGAAGATCATCCTCCTGAATCAGGACTAGCTTCAGACACAGATCACACACAGGACAATACTGTCAATGTTGCTTTGGTGGCTAGCAATCCATGTGAGAAAATGGATGATGAGCATGTTTATGTTATACATCGCGGCATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGCGTTCGCAGAAATAACTCAGATGGCAATTCAAATGCAAGTTCCAGTGCAGCAAAATCTGATGAGAGGAATACTGGTGGTGATTCAAGGAGGTGCTTTTTGCCGGGAATTGGTCTACACTTGAATGCGCTTGCAACATTGAAAGAACACGGCGGCATGAAAAATGAGAAGTCTTTTTCTGGAAGACAAGCTAATTTTCCTAGCACCGCTTCTTCCTTGTTACCGCAAGAACATCATCTATTATTGGGACCTGCACCCTCTGAAAGAGATCTGGAGCTACCAGAGAATGAGATTCAGCCTGTTGAAGATTGTAGTCAGTCATCTCACATGGCCAGTGAAGATTTCAATCAGAATAGCCCCAAAAAGAAAAGGCGGAAGGTGGAAATAGCTGGAGAAAGTGAGTCTTGCAAGCGGTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGAGTCTACTGTATTGAACCTTGCTCTTGTCAAGATTGCTTCAATAAACCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAGTCTCGTAACCCACTTGCATTTGCTCCTAAAGTCATCAGAAGTGCTGATTCTGTTTCTGAAATTGTGGATGATCCAAACAAAACTCCAGCTTCAGCACGGCACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAACGCATTTGGTAGAAAGGATGGTTCTGCAGGAATAGAGGCTGAGGCAGAAGAAGAAACAGAAGCATTGGAAAAGGGTGAGGTGGAAAAGGCTTCACAGAAAACTGAAATTCAGAATATTGAAGACAATCAGAATTCTGCTCTTCCAACCACACCCCTACGGCTTTCCAGACCATTGCTTCCATTGCCCTTTTCATCGAAAGGAAAGCCGCCTAGATCTTTCATTGCTACGATCTCGGGTTCTGGATTGATTGCCAGCCAAAAGCTTGCTAAACCAAATATCCTTCGGCCTCAAGTTAAGTTTGAAAAACCTCATCAAACTGTGGCAGAGGATGAAATGATGGATATTATCCAATGTGATAGCTCTCCTATGGCTTGCATAAAAACCTCTTCTCCAAATGGCAAAAGGATTTCCTCTCCTAATTGTGAACTTGGAACATCTCCAACTCGCAGAGGTGGCAGGAAGTTGATATTACAGTCCATCCCTTCCTTTCCTTCCCTCACCCCTGGCCCTCACCATTAG 2262 0.4288 MDTPDRATANNLNPPKFEDSPVFNFLNSLSPIKPVKSVHITQTFSSISFSSPPSVFTSPHVNPNKESRFLRRHNLLDTSKPKVTSEDENQIGSGEEALTDSTHACNNSRELDKKSGKGTSIGDASIEPANEHAKFSIELPQTLKYDSGSPGYDPILCGDEAATGVAGSHEASKKDSVEGELHFHGICQTQQKIDITESDWDNLINNASDMLIFSSPNVSEAFKDLMNKQLDPSGRLSNFMTTLPESSTNNSRIMHIVNQVASGSGHENEDHPPESGLASDTDHTQDNTVNVALVASNPCEKMDDEHVYVIHRGIRRRCLDFEMASVRRNNSDGNSNASSSAAKSDERNTGGDSRRCFLPGIGLHLNALATLKEHGGMKNEKSFSGRQANFPSTASSLLPQEHHLLLGPAPSERDLELPENEIQPVEDCSQSSHMASEDFNQNSPKKKRRKVEIAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSADSVSEIVDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAGIEAEAEEETEALEKGEVEKASQKTEIQNIEDNQNSALPTTPLRLSRPLLPLPFSSKGKPPRSFIATISGSGLIASQKLAKPNILRPQVKFEKPHQTVAEDEMMDIIQCDSSPMACIKTSSPNGKRISSPNCELGTSPTRRGGRKLILQSIPSFPSLTPGPHH 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211505g00007 753 ProSiteProfiles CRC domain profile. 459 584 IPR005172 -
Stsc211505g00007 753 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 749 IPR044522 GO:0003700
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 327 346 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 710 732 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 48 125 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 1 20 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 327 353 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 65 84 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 617 632 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 710 726 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 423 451 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 599 633 - -
Stsc211505g00007 753 SMART CXC_2 458 499 IPR033467 -
Stsc211505g00007 753 SMART CXC_2 544 585 IPR033467 -
Stsc211505g00007 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 461 496 IPR005172 -
Stsc211505g00007 753 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 547 582 IPR005172 -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 85 105 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 261 283 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 424 439 - -
Stsc211505g00007 753 MobiDBLite consensus disorder prediction 48 64 - -
Stsc211505g00007 753 Coils Coil 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211505g00007 Stsc-Chr211505 86491 91385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211505g00007 17 749 CPP Transcription Factor Family AT4G14770 44.459 7.09e-167 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Stsc211505g00007 TCR 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211505g00007 - - adu:107467046 1233.39