Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211505g00006 ATGTATTCGGAAAGTGAGAATGTTGGGACACCAAAAGGGGCATTGGAAGAAGCTAAGGCGTTGAATTCAAAGATGAAGGGCAGTGAGAGCCTAACCAGCAAAGATATGGTGTTTAGAGCTGATAAGATTGATCTCAAGAGTTTGGATACTGAGCTAGAAAAACACCTCAAAAAGGTTTTGTCTAGACATATTGAGGCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCAAAACTGGATTTGCAATATGTTGTGGCAAATGGGGCTTATGGCACTGTCTACAAGGGCATCTATGATGGCCAACATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGGTGCTTCTGCTGCTTCCTTAAGAGCATCATTCAAGCAGGAGGTTACAGTCTGGCAAAAACTTGATCATCCAAATGTTACAAAATTTGTTGGAGCTTCAATGGGGACATCAAACCTCAGGATTCCCATAGAAGCTGGAGGCCAAGATTCTCTCCCTACACGAGCATGTTGTGTAGTTGTGGAGTTCATCCCAGGTGGCACTCTGAAAAATTACTTGTTTAAGAACAGAAGAACGAAACTACCCTACAAGACTGTAATTCAGCTAGCTCTGGACCTCTCACGAGGCCTTAGTTATCTTCATTCAAAAAAAATTGTCCACCGCGATGTTAAAACTGACAATATGTTGCTAGAGATGAATCGAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGTATTGAGGCTTTGAATCCAAGTGAGATGACCGGTGAAACCGGAACAATTGGATATATGGCACCAGAGGTTTTAGAAGGCAAGCCATACAATAGAAGATGTGATGTGTATAGCTTTGGCATTTGCTTGTGGGAGATATATTGTTGCGATATGCCATATTCAACACGAAGCTTTGTTGATGTCTCATCCGCGGTCACTCGCCACAATTTGCGACCGGATATTCCTCGATGCTGCCCAAGTGCATTGGCGAGCATCATGCGAAAATGCTGGGATGGGAACCCGAATAAGCGGCCAGAGATGCAGGAGGTGGTGCAAATGCTGGAAGCAATTGATACCGGCAAAGGAGGAGGGATGCTACCAGATGATCAGGCTCCATTTTGTTTCTGTTTTGGAACGGTCCGTGGTCCTTAA 1146 0.4415 MYSESENVGTPKGALEEAKALNSKMKGSESLTSKDMVFRADKIDLKSLDTELEKHLKKVLSRHIEAKRPKEEWEIDLAKLDLQYVVANGAYGTVYKGIYDGQHVAVKVLDWGEDGGASAASLRASFKQEVTVWQKLDHPNVTKFVGASMGTSNLRIPIEAGGQDSLPTRACCVVVEFIPGGTLKNYLFKNRRTKLPYKTVIQLALDLSRGLSYLHSKKIVHRDVKTDNMLLEMNRNLKIADFGVARIEALNPSEMTGETGTIGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYSTRSFVDVSSAVTRHNLRPDIPRCCPSALASIMRKCWDGNPNKRPEMQEVVQMLEAIDTGKGGGMLPDDQAPFCFCFGTVRGP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211505g00006 381 ProSiteProfiles Protein kinase domain profile. 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211505g00006 381 SMART serkin_6 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211505g00006 381 Gene3D Transferase(Phosphotransferase) domain 1 180 360 - -
Stsc211505g00006 381 CDD STKc_MAP3K-like 89 352 - -
Stsc211505g00006 381 Pfam Protein tyrosine and serine/threonine kinase 82 352 IPR001245 GO:0004672|GO:0006468
Stsc211505g00006 381 FunFam Kinase suppressor of Ras 1 69 160 - -
Stsc211505g00006 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Stsc211505g00006 381 Gene3D Phosphorylase Kinase; domain 1 69 160 - -
Stsc211505g00006 381 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Stsc211505g00006 381 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Stsc211505g00006 381 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Stsc211505g00006 381 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Stsc211505g00006 381 SUPERFAMILY Protein kinase-like (PK-like) 66 352 IPR011009 -
Stsc211505g00006 381 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211505g00006 Stsc-Chr211505 70301 72504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211505g00006 22 381 MAP Kinase Kinase Kinase AT3G22750 73.699 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc211505g00006 PK_Tyr_Ser-Thr 6.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211505g00006 - - gmx:100803917 615.535