Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211503g00006 ATGTTCAAAACTTTCACAGTTAGGGTTGTTGAGCAATGCAAGGTTTCTCCTCCACCCAATACAACTCCACCAACCTCACTCATCCCCCTCACATTCTTTGATCTTCCATGGCTTTTCTTCTCTCCAAGCCAACCTCTCTTCTTCTATCATCTTCCCTACTCCAATTCCCACTTCAAAACCATAACCATCCCAGCACTTAAGCATTCCCTTTCCCTCACACTTCAACATTACTACCCTTTCGCCGGCACACTTTTTCTCCCCTCCTCATCAGACGAAGAAGAACCAGCTGAATCCAATAACAAACCCCATCTTGTTTTTACAAGCCACGATTCATCGGTTTCACTAACCATTGCTATCTCAAATGGTGGTGACTTTGAACACTTATGTAACAATCATCCAAGAGATGCTAATGATTTCCACTTACTTGTCCCCAAACTAGTAGGGCCAAATCTTGCATGCATAAGAGGGAATAAAGAAGTTCCCTTGCTAGCTATTCAAGTAACCACTTTCCCAAACGTTGGCATTTGCATTGGACTAGCGTTTCACCACGTTGTTGCTGATGGCAGAACCTTCAGCAATTTCTTCAAGACTTGGGCTTCCTATTGTTCTCTACTTGGAACTACTTCATCACCATTATTTCCGCTGGAATCGCTACCGTTCTACGACCGGAGTGTGATTGTTGATGCAAAAGGACATGAGGAGGTCTTCTTGAAAGAATGGAGAAGAACGCTGATTGCCATGCAAAGAGAAAACAAAGTAGATCTATCAAATACAACCATGGTTAGAGCCACTTTCTTGATGGGTCCCACCGAAATGGAGCAGGTAAAGGGCTTGATTATTGGTTGTTGCAATGAAAAGAATAAGGCTATGCCGGTGCGTGTATCTGCTTACGTGTTAACTTGTGCATTGTTGTGGGTTTGTTTGGTCAAAACCCAACCAAGTATGAACCAGAATATGGGAGACGAAGATCCTATTTACTTTGGGTTCATTGCTGGTGGCATAACAAGGTTGGATTTTGAAGTTCCCATTTCATATTTGGGAAATTGTGTTGGATTTGGAAGGGCATCATTGAGAAGAAGAGATCTAGTTGGAGAAGAGGGAGTTATTGTTGCGGCTAAAGCAATTGGAAGCACAATAAAGAAGCTTGATGAATCAATTCTTGGAGAGGCAGAGAAATGGGTTTTGGAATGGAGGGTTTTACATGGTTCGGAGCAACATGTACATGCTACTTGGTCTCCCAAATTGAAGCTTTATGAGTGTGATTTCGGGTGGGGTAAGCCAAAGAAAATAGAGGAGATCTCAATTGATTCTACAAGAGCTGTTTCTCTTCTACAGAGCAGAGATGTTGAGGGTGGAATTGAGATTGGTTTAGCTTTACCTAAGAATCAAATGGAAGCTTTCACCATTTTGTTCAACCAAACTCTCAATTCTCTTCCATGA 1440 0.4222 MFKTFTVRVVEQCKVSPPPNTTPPTSLIPLTFFDLPWLFFSPSQPLFFYHLPYSNSHFKTITIPALKHSLSLTLQHYYPFAGTLFLPSSSDEEEPAESNNKPHLVFTSHDSSVSLTIAISNGGDFEHLCNNHPRDANDFHLLVPKLVGPNLACIRGNKEVPLLAIQVTTFPNVGICIGLAFHHVVADGRTFSNFFKTWASYCSLLGTTSSPLFPLESLPFYDRSVIVDAKGHEEVFLKEWRRTLIAMQRENKVDLSNTTMVRATFLMGPTEMEQVKGLIIGCCNEKNKAMPVRVSAYVLTCALLWVCLVKTQPSMNQNMGDEDPIYFGFIAGGITRLDFEVPISYLGNCVGFGRASLRRRDLVGEEGVIVAAKAIGSTIKKLDESILGEAEKWVLEWRVLHGSEQHVHATWSPKLKLYECDFGWGKPKKIEEISIDSTRAVSLLQSRDVEGGIEIGLALPKNQMEAFTILFNQTLNSLP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211503g00006 479 PANTHER - 7 477 - -
Stsc211503g00006 479 Pfam Transferase family 27 468 - -
Stsc211503g00006 479 Gene3D - 257 478 IPR023213 -
Stsc211503g00006 479 Gene3D - 6 253 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211503g00006 Stsc-Chr211503 44714 47310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211503g00006 45 467 Monolignol Biosynthesis Gene Families AT5G48930 22.581 2.84e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211503g00006 - - gmx:100817166 587.03