Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211501g00027 GTCAGAGCCGAATCCTACGGTTCAGGAACACAGTCCAACTGTGCCCCAACCATTTCCTTCGATTTGAAAGTTGACGTCAAAGGCCGCCACGTCATCTTGGTTGAAGACATTGTAGATACAGGACATACAGTATTTAGAGTTATTGAGCACTTGAAATCAAAAGGAGCATCCTCTGTCTCTGTCTGCACTTTCCTTGATAAACCAGCAAGGAGAAAAGTTCATGTTCAGCTACTTGGTCAAGGCAAATTCTACTGCGGATTTGAGTGTCCAGATTATTTTGTTGTTGGATATGGGATGGATTTTGCAGAACTGTATAGAAACTTACCCTACATTGGTGTCTTGAAGCCTGAACATTACCAGTGA 363 0.427 VRAESYGSGTQSNCAPTISFDLKVDVKGRHVILVEDIVDTGHTVFRVIEHLKSKGASSVSVCTFLDKPARRKVHVQLLGQGKFYCGFECPDYFVVGYGMDFAELYRNLPYIGVLKPEHYQ 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211501g00027 120 CDD PRTases_typeI 1 88 IPR000836 -
Stsc211501g00027 120 SUPERFAMILY PRTase-like 4 119 IPR029057 -
Stsc211501g00027 120 Gene3D - 1 120 IPR029057 -
Stsc211501g00027 120 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 1 119 - -
Stsc211501g00027 120 Pfam Phosphoribosyl transferase domain 1 101 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211501g00027 Stsc-Chr211501 163858 165178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211501g00027 1 120 PRT Gene Family AT1G71750 66.923 3.36e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211501g00027 K00760 - gmx:100037484 212.616