Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211501g00018 ATGCACTTCCCCTGGACTCATGTCCCTGCCAATATTGCCGCTCAAGTCTCTGCCTCCATCTGTGCCTGCTTTGCTCTCAAGGGCGTTTACCACCCTTACCTCACGGCGGCGTCACCATCCCTTTTGACATTACCGTCGGGCAGGCCTTTGCCACTGAGTTCATCATCACTTTCATTCTCATGCCAACAAGTGACGGTTCAATTAACAGGTTCGAACATTGGGTCCAGCGGTAAACGGCAGGGAATTACAAGCATATATGGCTGTACTTGGTGGCGCCGACATTGGGTGCTCTTTCAGGCGCCGGTGAAGCTGCAGGAAAGTGAGGGTCAGCCACCGCGACAGACTAGGAGCTTTCGTGACAGGGCTGGGTAG 372 0.543 MHFPWTHVPANIAAQVSASICACFALKGVYHPYLTAASPSLLTLPSGRPLPLSSSSLSFSCQQVTVQLTGSNIGSSGKRQGITSIYGCTWWRRHWVLFQAPVKLQESEGQPPRQTRSFRDRAG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211501g00018 123 SUPERFAMILY Aquaporin-like 2 47 IPR023271 -
Stsc211501g00018 123 Gene3D Glycerol uptake facilitator protein. 1 71 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211501g00018 Stsc-Chr211501 104521 105369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211501g00018 2 119 Major Intrinsic Protein MIP AT4G10380 34.591 1.95e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211501g00018 K09874 - gmx:100775229 77.4109