Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211496g00022 ATGGTGAAAGGATCTCGGTCTCAGCTTTCGTTGAATAATTACGATGGTAATGAAGATGAAGACATTGAAACTATCAACTACGAAAGTGGTAGTGACAATGAAGATAATCCAGATCACCCTGAGTCTTTCACTTCTAGGCAATGGCCTCAAACTTTCAGAGAAGCAACTGATTCTTACTCCATTGCTGCAGCTCCGAATCTTGGATCATTTCTTCGAGGACCAAGTGTTATCTATGCAAGCTTTGTCAATAAGTCCAAGAGTTACTTAGAACTAGATGGAAAGGCTTCTTTTCTATCTGGTATTGGACATGGTAGTGTACTTCAAGATGGGGTCACAAGACAACAATCAACATGGTGGGAGAAAGCTTCAGTTCAAATGCAAATTCCTGAAGAAATTCCCCTTGGATATGGATGCAACCTCACTCAGACTATATTCAATGGTATTAATGTTATGGCTGGAGTTAGCCTTCTGTCTTCACCTTTAACAGTGAAGCAAGCAGGGTGGGCGAGCTTGCTGGTGATGCTTTTTTTTGCGGTTATGTGTTTTTATACAGCAGACCTTATGAGACACTGCTTTGAAAGCAGAGAAGGGATTGTCAGCTACCCAGATATAGGAGAAGCTGCATTCGGCAGATATGGCCGTCTTGTTGTATCGATCATTTTGTACATTGAATTATTTTCATATTGTGTGGAATTTATCATCATGGAAGGGGATAACCTTACCGGGCTGTTTCCCGGAACATCTTTGGATATGGGAAGTCTCCACTTGGACTCAAAACATTTGTTTGGAATTTTGACTGCACTTATCATTCTCCCTACTGTTTGGTTAAAGGATCTTCGCATAATCTCTTATCTCTCAGCTGGAGGTGTAATTACCACAATTGTGATCATTTTATGTGTGCTTACAGTTGGGGCAACAGATGTTGGATTCCATCCCAGTGGGTCTTTCATCCATTGGGGTGGAATTCCATTTGCATTCGGTATATATGGGTTTGGCTTCGCAGGGCACTCTGTTTTTCCGAATATTTATCAGTCTATGGCCAACAAACGAGAATTTAACAAGGCAATCCTTATAGTTTTTATCTTATGCGTCTTTCTATATGGACTCGTTGCAATCCCGGGATATCTCATGTTTGGTGACGAGGTTCTGTCTCAGATAACATTGAACCTGCCTCCTAATGCATTTGCTTCCAAAATTGCCCTGTGGATAATAGAGTCTGGAGGAGTTGCTGCCCCACAGAATTTCAAGTACCACTTGGTGTTTCATGCTTCTCAGAACAGTATTGGTTCTGGCTACACTTTTAGCTGCTTTTCTAATTCCTTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTGCTCAGTGTACTTGTGGCCTTGATAATGCCAGCTTTATGTTTTCTGAGAATTGTTGGAAAAAAGGCAACAAGTACACAGGTTACGTTAAGCATCATAATAGCTGCAGTGGGAGTCGCCAGTGCTTGCCTTGGAACATATTCAGCTTTGATGAAAATTATTGA 1518 0.4117 MVKGSRSQLSLNNYDGNEDEDIETINYESGSDNEDNPDHPESFTSRQWPQTFREATDSYSIAAAPNLGSFLRGPSVIYASFVNKSKSYLELDGKASFLSGIGHGSVLQDGVTRQQSTWWEKASVQMQIPEEIPLGYGCNLTQTIFNGINVMAGVSLLSSPLTVKQAGWASLLVMLFFAVMCFYTADLMRHCFESREGIVSYPDIGEAAFGRYGRLVVSIILYIELFSYCVEFIIMEGDNLTGLFPGTSLDMGSLHLDSKHLFGILTALIILPTVWLKDLRIISYLSAGGVITTIVIILCVLTVGATDVGFHPSGSFIHWGGIPFAFGIYGFGFAGHSVFPNIYQSMANKREFNKAILIVFILCVFLYGLVAIPGYLMFGDEVLSQITLNLPPNAFASKIALWIIESGGVAAPQNFKYHLVFHASQNSIGSGYTFSCFSNSFFWACDGFNWFSAQCTCGLDNASFMFSENCWKKGNKYTGYVKHHNSCSGSRQCLPWNIFSFDENY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211496g00022 505 MobiDBLite consensus disorder prediction 1 15 - -
Stsc211496g00022 505 Pfam Transmembrane amino acid transporter protein 140 400 IPR013057 -
Stsc211496g00022 505 PANTHER OS05G0424000 PROTEIN-RELATED 143 403 - -
Stsc211496g00022 505 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211496g00022 Stsc-Chr211496 155642 159308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211496g00022 12 428 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.952 8.70e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211496g00022 K15015 - gmx:100790344 516.538