Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211496g00016 | ATGTCTTCTACACTTGAGGAATCTCTAAGATCTCTATCGTTGGATTACCTCAACCTCCTAATCAACGGTCAGGCCTTCAGTGACGTCACCTTCAGCGTCGAAGGCCGTCTAGTACACGCGCACCGCTGTATCCTGGCGGCCAGAAGTCTATTCTTCAGGAAATTTTTCTGCGGGCCCGACCCTCCCTCGCCCTCTAGCCTAGACCCTCCAGGCCAGAGGATGAACTCGGGGTCGGGCTGCAGAACCCCTACGGGGGTTATACCCGTGAACTCTGTGGGGTACGAGGTGTTCCTGCTCATGCTGCAGTTCTTGTACAGCGGGCAGGTATCCATCGTCCCCCAGAAGCACGAGCCACGGCCCAATTGCGGCGAGAGAGGTTGCTGGCACACGCATTGCTCCTCCGCCGTGGATCTCGCCCTTGACACACTCGCCGCCGCTAGATACTTCGGTGTTGAACAGCTTGCATTGCTAACTCAGAAACAACTAGCGAGCATGGTGGAGAAAGCTTCCATTGAAGATGTCATGAAAGTGTTGGTAGCTTCAAGAAAGCAAGACATGCACCAACTATGGACAACATGTTCCCACCTAGTAGCCAAGTCCGGCCTCCCACCGGAGGTTCTCGCCAAGCACCTCCCCATCGACATCGTCGCAAAAATCGAAGACCTCCGCCTCAAATCCTCCATCGCCCGCCGTACCGCCGCCTTCCTCCCCCACCACCACCACCCGGACCTTTCGGCCGCAGCAGACCTCGAGGACCAAAAGATCCGCCGGATGAGACGAGCCCTCGACTCATCCGACGTGGAGCTTGTGAAGCTAATGGTAATGGGAGAAGGGCTCAATCTCGACGACGCGCTGGCTCTGCACTACGCGGTCGAGAATTGTAGCCGAGAAGTGGTGAAAGCCCTGCTGGAACTCGGGGCAGCTGACGTCAACTACCCCGCGGGTCCAGCAGGGAAAACACCACTACATATCGCGGCGGAAATGGTTTCGCCCGATATGGTGGCGGTCCTGCTGGACCACCACGCTGACCCAAACGTCAGAACCGTTGACAATGTGACACCATTGGACACACTCAGAACCCTAACCTCTGATTTTCTGTTCAAAGGCGCAGTCCCTGGCTTAACTCACATTGAACCAAACAAGCTAAGGCTGTGTTTGGAGCTTGTTCAATCCGCTGCACTTGTTTTGTCTCGTGAAGAAGGTAACGCCATTAATAACAACAACAATAACAATGTTGCTTCTACAACGCAACACCATCATGTTTATCCTCCTTCCATGAACGAAGATCATCATAGCAGTTCAAGCAGTGGCGGCAACAACAACAATAACAATAACAGCAACATTAACTTGGATTCCAGGTTGGTGTATCTTAACCTTGGTGCCACACTCGGTGCTGGTGGTGGATCCGCTCAAATGAGTGATGATGATAACCGCCATGGGGATGCAGCAATGTACCATCACCATCACCACCACCATCACCATTCTCATCATAATAACTTCTAG | 1503 | 0.5336 | MSSTLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSPSSLDPPGQRMNSGSGCRTPTGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEDLRLKSSIARRTAAFLPHHHHPDLSAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDNVTPLDTLRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNAINNNNNNNVASTTQHHHVYPPSMNEDHHSSSSSGGNNNNNNNSNINLDSRLVYLNLGATLGAGGGSAQMSDDDNRHGDAAMYHHHHHHHHHSHHNNF | 500 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211496g00016 | 500 | Pfam | Domain of unknown function (DUF3420) | 201 | 259 | IPR024228 | - | |
Stsc211496g00016 | 500 | ProSiteProfiles | BTB domain profile. | 27 | 113 | IPR000210 | GO:0005515 | |
Stsc211496g00016 | 500 | FunFam | regulatory protein NPR5 isoform X2 | 248 | 365 | - | - | |
Stsc211496g00016 | 500 | CDD | BTB_POZ_NPR_plant | 10 | 166 | - | - | |
Stsc211496g00016 | 500 | MobiDBLite | consensus disorder prediction | 484 | 500 | - | - | |
Stsc211496g00016 | 500 | Pfam | BTB/POZ domain | 18 | 116 | IPR000210 | GO:0005515 | |
Stsc211496g00016 | 500 | SUPERFAMILY | POZ domain | 10 | 164 | IPR011333 | - | |
Stsc211496g00016 | 500 | PANTHER | BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 | 4 | 491 | IPR044284 | GO:0099402 | |
Stsc211496g00016 | 500 | SUPERFAMILY | Ankyrin repeat | 276 | 359 | IPR036770 | - | |
Stsc211496g00016 | 500 | ProSiteProfiles | Ankyrin repeat region circular profile. | 317 | 347 | - | - | |
Stsc211496g00016 | 500 | MobiDBLite | consensus disorder prediction | 466 | 500 | - | - | |
Stsc211496g00016 | 500 | SMART | ANK_2a | 282 | 312 | IPR002110 | GO:0005515 | |
Stsc211496g00016 | 500 | SMART | ANK_2a | 317 | 346 | IPR002110 | GO:0005515 | |
Stsc211496g00016 | 500 | Pfam | Ankyrin repeats (3 copies) | 265 | 347 | IPR002110 | GO:0005515 | |
Stsc211496g00016 | 500 | SMART | BTB_4 | 27 | 166 | IPR000210 | GO:0005515 | |
Stsc211496g00016 | 500 | FunFam | regulatory protein NPR5 isoform X1 | 6 | 199 | - | - | |
Stsc211496g00016 | 500 | Gene3D | - | 248 | 365 | IPR036770 | - | |
Stsc211496g00016 | 500 | ProSiteProfiles | Ankyrin repeat profile. | 317 | 349 | IPR002110 | GO:0005515 | |
Stsc211496g00016 | 500 | Gene3D | Potassium Channel Kv1.1; Chain A | 2 | 199 | IPR011333 | - | |
Stsc211496g00016 | 500 | MobiDBLite | consensus disorder prediction | 403 | 447 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211496g00016 | Stsc-Chr211496 | 90690 | 93792 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Stsc211496g00016 | BTB | 2.7e-14 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211496g00016 | K14508 | - | qsu:112012060 | 721.85 |