Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211495g00012 ATGGCACCCTCATTCGACCAAACAGCACAAACCGTATGTGTAATGGACGCTTCCGCCCATTTGGGGTTCGCCCTTGTCGAGTCACTCCTTCATAGGGGTTACACCGTTCATGCCTCCCATCAACCACATCCTAATGGGGACGACATCTTCAACGGGATTTCTAATGACTCTAACAAGCTCAAGATATTCCGCTCTGACCCTTTTGATTACCAATCCATCATCCACGCCCTTAAAGGCTGCTCTGCTTTGTTCTACTCTTTTCAACCTCCTTTTGATCAACCTGATTATGATCAGGAATACATGGCTGACGTGGAAGTGAGGGCCGCACACAACGTGCTTGAAGCTTGTGCACAAACAGAAACCATTGACAAAGTTGTTTTTACATCCTCAGCCACCGCTGTTGTTTGGAGAGAGGATCGTAAATCCATGGAACTTGACTTGGACGAGAGGCATTGGAGCGATGTCAATTTCTGTCGTAAATTCAAGTTGTGGCATGCGATGTCAAAGACGATGGCAGAGAAGACAGCGTGGGCCCTAGCAATGGACAGAGGGATGAATATGGTGTCAATAAACGCAGGTCTTTTGATGTCCCCAGATCTGTCCATCAACAACCCTTACCTCAGAGGAGCCGCTGAGATGTACGAAGATGGCGTCTTCGTAACCGTTGATCTTCCTTTTCTCGTCGATGCACACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCATATCATTAACACCCAAGACGATGCCCTGACCCTCGCCCGCAAGTTGACCCCCGATGCTGCTTCTTCCATGCCTCAAAGAGAGGAGCATGGGAAGAGTTTCATAGAGCAGAGAATCAGCAACAAGAAGCTGAACAAGTTGATGGTAGACTTTGAAGGTTGA 906 0.4779 MAPSFDQTAQTVCVMDASAHLGFALVESLLHRGYTVHASHQPHPNGDDIFNGISNDSNKLKIFRSDPFDYQSIIHALKGCSALFYSFQPPFDQPDYDQEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKSMELDLDERHWSDVNFCRKFKLWHAMSKTMAEKTAWALAMDRGMNMVSINAGLLMSPDLSINNPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEDVSSYGRYLCFNHIINTQDDALTLARKLTPDAASSMPQREEHGKSFIEQRISNKKLNKLMVDFEG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211495g00012 301 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 17 175 IPR002225 GO:0003854|GO:0006694|GO:0016616
Stsc211495g00012 301 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 301 - -
Stsc211495g00012 301 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 292 - -
Stsc211495g00012 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 266 IPR036291 -
Stsc211495g00012 301 CDD FR_SDR_e 12 297 - -
Stsc211495g00012 301 Gene3D - 4 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211495g00012 Stsc-Chr211495 103780 107063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211495g00012 10 299 Monolignol Biosynthesis Gene Families AT5G58490 31.148 2.94e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211495g00012 - - gmx:100790333 505.753