Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211494g00003 ATGCATTATCACGTTTGTCAGGTAAGGAAGGAGCACAACAATTCAAAACATTCAGTATTAAATAGTGTTGTGGGAACCCTTGATTTCAATATTCGCTATTTGCTGCAAGGGGAGACCTTTCCAGGGGAACATGTGAAGGCTCCGCTTTTTTGTAGCATCAACAGAACGCCGCCGAGCAGATACGGTTACATTGCAAACTTATGTGTCGCTAAATCAGCTCGCCAACAGGGAATTGCAAGCAACATGTTGTATTTTGCTATTGAAGCTGCCAAATATAATGGGGTGACACAAATATATGTTCATGTTGATAGAAATAATAGGCCTGCACAGATGTTGTACCAGAAGATGGGCTTTCAGATGGTTGAGACAGCAAACGCCAAATTGTCGCTGGAGGAAACGTTCTTGCTAAGATTGCAGACTTAA 423 0.4208 MHYHVCQVRKEHNNSKHSVLNSVVGTLDFNIRYLLQGETFPGEHVKAPLFCSINRTPPSRYGYIANLCVAKSARQQGIASNMLYFAIEAAKYNGVTQIYVHVDRNNRPAQMLYQKMGFQMVETANAKLSLEETFLLRLQT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211494g00003 140 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 139 - -
Stsc211494g00003 140 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 57 123 IPR016181 -
Stsc211494g00003 140 CDD NAT_SF 50 101 - -
Stsc211494g00003 140 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 50 137 IPR000182 GO:0016747
Stsc211494g00003 140 Pfam Acetyltransferase (GNAT) family 23 118 IPR000182 GO:0016747
Stsc211494g00003 140 Gene3D - 3 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211494g00003 Stsc-Chr211494 13604 14991 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211494g00003 Acetyltransf_1 1.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211494g00003 - - gmx:100795426 225.328