Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00034 ATGGGTGGTAATCTTAATGCTGAATTATCCAAGAAAACTCCAATTCTTGGCCTCAAGGTTTGGGAAATAGTTGGAGTTGTGGTTGGATTGTCTATTATCATCATCCTCTCCATGCTCTCACTGTGTCTTACCTCAAGGAAGAAATCTAGAAAATCCAATGATAAGAAGATTCCTGTTAGTCAGATACCAACTGTCTCCAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCACCCAATGGCTTTGCTCCCCGTGATGGAATACTTCTTACCATTCATGACAAAACCGCTGACAAAGAATCAGACAAGGTCATGGTTCATTTAGGCGTGGGGAAGATGAGGAATAATGGGGATAGTAGCAGCCAATCAGGTTCATTTCATCACATAGAGAAAGAGGGAGGTGGGTCACTGTCTGGAGAACATGGTAGCTCCGGCACGGTTGCCATGCACAAGCACTCTTCCTCTTACCCTATAACAGCTCCTTCGCCTCTGTCTGGTCTCCCAGAGTTCTCTCACTTGGGCTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCTACAAACCGGTTTTCCAAAGACAATGTCATTGGTGAAGGTGGTTATGGAATTGTTTACCGAGGACAATTGATCAACGGGACTCCGGTGGCAGTTAAAAAGATACTCAACAACATAGTGGAAGTTGAAGCCATTGGACATGTCCGGCACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATTGAAGGGACTCACAGGATGTTAGTCTATGAGTATGTGAATAATGGAAACTTGGAGCAATGGCTTCATGGAGGTATGCGTCACCATGGATATCTTACTTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATAAAGTCAAGCAATATATTAATTGACGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCAAAGTTATTAGGTGCTGGAAAGAGTCATGTCACAACACGAGTTATGGGAACCTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTTCTGAATGAAAAGAGTGATGTATATAGCTTTGGTGTTTTGCTACTGGAATCAATTACCGGAAGAGATCCAGTAGACTATGGACGCCCAACACACGAAGTGAATCTGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGATGGATCCAAACATCGAGACAAAACCATCAACCAGAGCTTTAAAGCGAGCTCTCTTAACTGCATTAAGATGCTTGGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTGCGCATGCTGGAGTCGGAGGAATACCCTTTAGCAAGAGAGGACCGGAGGAACAGAAGAAACCGAGGGGGAAGTGGTGATATTGATTCTCAAAAAGATTATTCTGACACAGACAAGAGTGAGGTTCAAGGTTCTAAATAA 1491 0.442 MGGNLNAELSKKTPILGLKVWEIVGVVVGLSIIIILSMLSLCLTSRKKSRKSNDKKIPVSQIPTVSKEIKEVRVEQVSPNGFAPRDGILLTIHDKTADKESDKVMVHLGVGKMRNNGDSSSQSGSFHHIEKEGGGSLSGEHGSSGTVAMHKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGIVYRGQLINGTPVAVKKILNNIVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGGMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLESITGRDPVDYGRPTHEVNLVDWLKMMVGNRRSEEVMDPNIETKPSTRALKRALLTALRCLDPDSEKRPKMSQVVRMLESEEYPLAREDRRNRRNRGGSGDIDSQKDYSDTDKSEVQGSK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00034 496 FunFam Putative receptor-like serine/threonine-protein kinase 259 470 - -
Stsc211493g00034 496 ProSiteProfiles Protein kinase domain profile. 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00034 496 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Stsc211493g00034 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Stsc211493g00034 496 CDD STKc_IRAK 197 455 - -
Stsc211493g00034 496 Gene3D Transferase(Phosphotransferase) domain 1 259 471 - -
Stsc211493g00034 496 SMART serkin_6 191 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00034 496 Pfam Protein kinase domain 192 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00034 496 PANTHER OS01G0323000 PROTEIN 4 471 - -
Stsc211493g00034 496 SUPERFAMILY Protein kinase-like (PK-like) 175 458 IPR011009 -
Stsc211493g00034 496 MobiDBLite consensus disorder prediction 139 154 - -
Stsc211493g00034 496 MobiDBLite consensus disorder prediction 440 490 - -
Stsc211493g00034 496 MobiDBLite consensus disorder prediction 440 496 - -
Stsc211493g00034 496 Gene3D Phosphorylase Kinase; domain 1 175 258 - -
Stsc211493g00034 496 MobiDBLite consensus disorder prediction 113 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00034 Stsc-Chr211493 168424 172132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00034 168 457 Trihelix Transcription Factor Family AT1G70460 48.185 2.30e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc211493g00034 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00034 - - gmx:100787014 806.208