Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00031 ATGGGGTCTGTTGGTGTGGCACCAACATCAGTCGTGAGAGAATCTGGTGGCGGCGGAGTTGATAGATTGCCAGAAGAGATGAACGATATGAAAATTAGGGATGATAAGGAAATGGAAGCTATGGTTGTTGATGGTAATGGAACGGAGACCGGCCATATCATTGTAACTACTATTGGTGGTAGAAATGGTCAACCAAAGCAGACTATAAGCTACATGGCAGAGCGGGTTGTTGGACATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTAGCTATCAAAAAGGTTCTTCAAGATAAGAGGTATAAGAACCGGGAGCTTCAGACAATGCGTCTTCTTGACCACCCAAATGTTGTCGCTTTGAAGCATTGTTTCTTTTCTACTACTGAGAAGGATGAACTATACCTTAATTTGGTACTTGAGTATGTTCCTGAAACAGTTAGTCGTGTGATCAAACATTACAACAAGTTGAACCAAAGGATGCCACTAATATATGTGAAACTCTATACGTACCAGATCTTTAGGGCACTATCCTATATACATCGTTGCATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTTTTAGTCAATCCACATACCCACCAGGTTAAATTATGTGATTTTGGGAGTGCAAAAGTCTTGGTAAAAGGCGAACCAAATATATCATACATATGTTCTAGATACTATAGAGCACCTGAGCTTATATTTGGAGCCACTGAATATACCACAGCTATTGACGTCTGGTCTGTTGGTTGCGTATTGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAACTTGTTGAGATCATCAAAGTTTTGGGCACTCCAACGAGGGAAGAGATTAAGTGTATGAACCCTAACTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATATTCCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTTCTACAATACTCGCCTAATCTGCGGTGCTCAGCTTTGGATGCCTTGACCCATCCTTTCTTTGATGAACTTCGTGATCCAAATGCTCGCTTACCAAATGGTCGATTCCTTCCACCATTATTCAATTTCAAAGCTCATGAACTGAAGGGGGTGCCAGTTGAGGTTCTGGTGAAATTGATTCCAGAGCATGCGAGGAAGCAATGCCCGTTTCTCGGATTGTGA 1224 0.4273 MGSVGVAPTSVVRESGGGGVDRLPEEMNDMKIRDDKEMEAMVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVSRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALDALTHPFFDELRDPNARLPNGRFLPPLFNFKAHELKGVPVEVLVKLIPEHARKQCPFLGL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00031 407 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00031 407 SMART serkin_6 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00031 407 FunFam Shaggy-related protein kinase kappa 151 399 - -
Stsc211493g00031 407 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524
Stsc211493g00031 407 Pfam Protein kinase domain 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211493g00031 407 MobiDBLite consensus disorder prediction 1 24 - -
Stsc211493g00031 407 Gene3D Transferase(Phosphotransferase) domain 1 151 399 - -
Stsc211493g00031 407 FunFam Glycogen synthase kinase-3 beta 55 150 - -
Stsc211493g00031 407 CDD STKc_GSK3 66 358 IPR039192 -
Stsc211493g00031 407 Gene3D Phosphorylase Kinase; domain 1 55 150 - -
Stsc211493g00031 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Stsc211493g00031 407 SUPERFAMILY Protein kinase-like (PK-like) 70 381 IPR011009 -
Stsc211493g00031 407 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 35 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00031 Stsc-Chr211493 155449 160059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00031 75 360 MAP Kinase Gene Family AT3G59790 35.374 2.73e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Stsc211493g00031 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00031 K27413 - tcc:18600618 808.905