Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00024 ATGGTGAGAGGTCTCATTCCATTGTTGTCAATGATTCTTGTTCAGTTGGCGTATACAGGGATGAGCATTACATCAAAGCTTGCCATAGAAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGCCAAATCTTTGCCACCATTGCCATTGCTCCCTTCACTTATTGGCTCGAATGGAAAACAGCTCCCAAGATGACAAGGCGCGTTATGATCCAAATAGTACTTTCTTCCATAACTGGAATAACAGCAAACCAGGTTCTGTTCTTCGTGGGTCTAAAATATTCAAGTGCAACAATTGCATGTGCACTCACCAATTTGCTCCCAGCTTTTACGTTTCTCCTCGCAGTCATCTTCAGACAAGAGAGTGTGGGAATGAAGAGAAAAGCAGGGGTAGCAAAGGTGTTAGGAACAGTATTGTGTGTAGGTGGAGCACTGCTTCTGTCATTCTACCATGGCAAAACAATTGGTTTAGGAGAATCAAGCATTCATTGGAGCTATGCTGATAAAATGGAAGGAAGAAGCAGCTTCGATGGGAATAACGGGAACTCGCTTCTTGGGCCTTTTCTTCTTGTGGTCAGTGCCCTTGTTTGGTCACTGTGGTTCGTGATTCAAGCAGACATGAGCAAGAATTTCCCAGCTCCATATACCAGCACCAACTACATGTGTTTCTTGGCCAGCATTCAGTGTGTTGTTCTTGCCTTGTCCTTTGATCATGCCCCTTCTTCTTGGTCTCTTCATGATCCTATGAGACTTGTCTCTGCTCTTTATGCGGGTGTGGTTTGCACTGGTTTAGCTTACTGTCTCATGTCATGGACCATAGAGAGGAAAGGTCCTTTATACGTTTCTGTATTTAGCCCCTTGCAACTTGTTCTCACTGCTGTTGCTAGCTGGGCATTGCTCAGGGAGAAACTATACATTGGAACTTTGATAGGGTCAGTGCTGATAGTGGGAGGGCTATATTGTGTTCTGTGGGGAAAGAACAAAGAGATGAATGAGGTGATGATTACTGAAAAAGAGACAGTCAAGTACAACGAGACTCATCATCATGCAAAGAATAGTTGTAGTGATATGGAGTTTCCTCCATCTTACAACTCCAACAATGACAATCATCATCGTGTAATTGTGGATGTCGCTTAG 1137 0.438 MVRGLIPLLSMILVQLAYTGMSITSKLAIEGGMNPLILVAYRQIFATIAIAPFTYWLEWKTAPKMTRRVMIQIVLSSITGITANQVLFFVGLKYSSATIACALTNLLPAFTFLLAVIFRQESVGMKRKAGVAKVLGTVLCVGGALLLSFYHGKTIGLGESSIHWSYADKMEGRSSFDGNNGNSLLGPFLLVVSALVWSLWFVIQADMSKNFPAPYTSTNYMCFLASIQCVVLALSFDHAPSSWSLHDPMRLVSALYAGVVCTGLAYCLMSWTIERKGPLYVSVFSPLQLVLTAVASWALLREKLYIGTLIGSVLIVGGLYCVLWGKNKEMNEVMITEKETVKYNETHHHAKNSCSDMEFPPSYNSNNDNHHRVIVDVA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00024 378 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Stsc211493g00024 378 Pfam EamA-like transporter family 6 148 IPR000620 GO:0016020
Stsc211493g00024 378 PANTHER WAT1-RELATED PROTEIN 7 337 IPR030184 GO:0016020|GO:0022857
Stsc211493g00024 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Stsc211493g00024 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00024 Stsc-Chr211493 120467 123444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00024 5 370 Nodulin-like Gene Family AT1G09380 56.831 3.07e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00024 - - gmx:100801512 514.612