Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00009 ATGGGTAGTGTCGACATGGTGTGTTCATCAGAAGAAGAAGCATTGATATCCAAAATATGCCATCTCTATTCACAGATAGCAAGTCTAGACTCTCTCAAACCCTGCAAGAATGTCGACACACTATTCACAGACCTTGTCATGACATGCATACCACCATCCTCCATCGATGTCACAACCCTCTCAAACAACCTCCAAGAGATAAGGTCCAACCTCATCAGGCTCTGTGGAATAGCAGAGGGACATTTGGAACACCACTATTCCACAATCCTTGGATCCTACGATAACCCTCTCCACCATCTCCATCTCTTCCCTTACTACAACAACTACCTCAAACTCGCTCTTCTTGAATTCACAATCCTCTCCCAACACAATAATCTTCCTCACAAGATTGCCTTCGTTGGCTCTGGTCCTCTTCCTCTCACTTCCATTGTTCTTGCCTCCAACCACCTCCCTTCCACCACTTTCCACAACTATGACATCGACGCCTCCGCCAACTCCAGCGCCATGCGCTTGGTTTCAGGCGATCCTGACTTGTCCAAGCGCATGGAGTTCCACACCAGTGACATACTTGATGTGACTTGCTTGGAGGAGTTTGAGGTTGTTTACTTGGCTGCGCTTGTGGGAATGGAGAAGGAGGAAAAGAACCGAGTGATTGATCACTTGGCAAAGCACATGGCACCTGGTGCTGTTCTTATGCTGAGGAGTGCTCATGGTGCTCGTGCTTTTCTGTACCCTGTTGTTGAACCATGTGATCTTAGAGGCTTTGAGGTTCTCTCTGTGTTTCACCCTACTGATGAGGTTATCAATTCTGTTGTCATAGCTCGTAAATACCCTCTTTCTGTGCTTGAACAACAACAACAACAACAAGGACTTTCTTCTTCTTCTATGATATTACCCAATAAGTGCTCTGATGAGATTCAAGTCTTCAACCGCCCTCTCAATCATGGCAACATCATCATTGAGGAATTAACCCTTGACGATCAACTCTGA 990 0.4606 MGSVDMVCSSEEEALISKICHLYSQIASLDSLKPCKNVDTLFTDLVMTCIPPSSIDVTTLSNNLQEIRSNLIRLCGIAEGHLEHHYSTILGSYDNPLHHLHLFPYYNNYLKLALLEFTILSQHNNLPHKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDIDASANSSAMRLVSGDPDLSKRMEFHTSDILDVTCLEEFEVVYLAALVGMEKEEKNRVIDHLAKHMAPGAVLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSVVIARKYPLSVLEQQQQQQGLSSSSMILPNKCSDEIQVFNRPLNHGNIIIEELTLDDQL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00009 329 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 7 281 IPR004298 GO:0030410|GO:0030418
Stsc211493g00009 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 264 IPR029063 -
Stsc211493g00009 329 Pfam Nicotianamine synthase protein 9 278 IPR004298 GO:0030410|GO:0030418
Stsc211493g00009 329 Gene3D Vaccinia Virus protein VP39 12 278 IPR029063 -
Stsc211493g00009 329 PANTHER NICOTIANAMINE SYNTHASE 3 9 288 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00009 Stsc-Chr211493 31035 32281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00009 11 276 Nicotianamine Synthase Gene Family AT1G56430 67.897 2.97e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00009 K05953 - gmx:100794250 476.092