Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211493g00002 ATGGTATCAAATAGCAAATCTCCCCAGGATCAGGAACAAGGTAAAGGTAGTTCTAAGATTCCACTTCAGAAATCAAAATGGGGAAAGGGAAACGCTCATCATACAAAACAACCATCTATTAGTGGCCTTAGAAATGTGATCAATGCATTTTGCTTGAATGGCCATAACTCCTACTTGGAAACCTTCCTCCGGAGAGTGGTCCGAGAGGAGGTGGAACGAAAAGTTCAGGAACATTACCCAACTCTAAGAGGAAGGGTTAATCATAATCTGGCAGGCACATCTGGAGCAGCCAAACCCTTTCAGCTGAGTTTTATCAACAAGTTGCCTGATACAATCTTCACACTTTCTAATATAATAGCAGAGGATGAATCACCCCTTCAAATTGCTCTATTTGATGTTACATCTCAGTCTATAGTCACTGAAGGTCTCTTATCCTCCATCAAGATAGAGATTTGTGTCCTCGATGGCGAATTCGGTTCCAATGGCACTGAGGATTGGATTCAAGAGGAATTCAATGGCAATATCTTACGCCAGAGAGATGGTAAAGGTCCATTGCTGATTGGAGAGAGGTTCATTACTCTCAAAAATGGGACTGGTTCTATCTCTAAACTTATCTTAACTGATAATTCAAGATGGTTAAGAAGCAGAAAGTTCAGATTAGGAGCCAAAGTTGTGAACCCAACTTCCTGTGATGCAAACATAAAGGAAGGTAAAAGTGAACCGTTCGTTGTCAAAGATAATAGGGGAGAAGCTTACAAGAAGCACTACCCTCCATCCTTGAATGATGATATATGGCGTTTGGAGAAAATTGCAAAGGATGGAAAAATCCACAAGCGTCTCTCTCAACGTGGAATTCACACTGTTAAGGATCTGCTGCAGCTACACACAACCAACCCATCTTCATTATATAAGATGTGTGGCAACATTCCAATTAAGTCATGGAATTCAATTACTTACCATGCCAAGACTTGTGTGATAAATGATCACAAGCTCTATAGCTATCGCGCGACACAGCAACCTATAGTCCTGCTATTCAATTCCATTTACATCCTTGTAGGAGTATTTGATGGCCAAAATTATTGTTCACTTGATGCACTCACTCCAAACGAGAAGAATTTGGTGGAAACCATGAAGCAGCAAGCATACAAGAATGTGAATAATTTAACATCAGTTGATGAGACTTCTCCATTGAGCTGCTTTGCACCAGTGGCATGTCCTCCAGACCAAGTCTTGGGAGATCAAAAAGAAACATGGCTAGGTTCTATACAACGCTGCACCTCTTCTTCATTTGTTGATGAAGGAGTGCCAAGTTACCAAATTTATGAAGATCCACTGCCAGAAACATGTTTTACAGGAGGTGACTTCCTCTCTGGAATGTTCATTGAAGGGAATAGTAGTTGGCAACTTAATGGCTCATCACATATTGAAGTTGTGCAAGGTGGTTATTCAGCTGGTAATTGCAGTTCAGAGATTCAATTCACAAATGATTGTTCACCTTATGCAGGACAATGGGAGGATGAAAATGGCTATTTATTTGGTTCTTCTTCTTATGGAGCAGAATTTACTAGTCATTCTGGTGGAGATATATCAAGCAGTGGGAAAAGTAAAGCAGTGTGGTTTAAAATTCTGAATGCTCTCAAATGGGTCATATCAGTTAAAAAATATGCAGCTGCAAGAAAGAATGCAGAGCTGTTTTACTGTGACTATTAG 1710 0.4023 MVSNSKSPQDQEQGKGSSKIPLQKSKWGKGNAHHTKQPSISGLRNVINAFCLNGHNSYLETFLRRVVREEVERKVQEHYPTLRGRVNHNLAGTSGAAKPFQLSFINKLPDTIFTLSNIIAEDESPLQIALFDVTSQSIVTEGLLSSIKIEICVLDGEFGSNGTEDWIQEEFNGNILRQRDGKGPLLIGERFITLKNGTGSISKLILTDNSRWLRSRKFRLGAKVVNPTSCDANIKEGKSEPFVVKDNRGEAYKKHYPPSLNDDIWRLEKIAKDGKIHKRLSQRGIHTVKDLLQLHTTNPSSLYKMCGNIPIKSWNSITYHAKTCVINDHKLYSYRATQQPIVLLFNSIYILVGVFDGQNYCSLDALTPNEKNLVETMKQQAYKNVNNLTSVDETSPLSCFAPVACPPDQVLGDQKETWLGSIQRCTSSSFVDEGVPSYQIYEDPLPETCFTGGDFLSGMFIEGNSSWQLNGSSHIEVVQGGYSAGNCSSEIQFTNDCSPYAGQWEDENGYLFGSSSYGAEFTSHSGGDISSSGKSKAVWFKILNALKWVISVKKYAAARKNAELFYCDY 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211493g00002 569 Pfam Calmodulin binding protein central domain 259 324 IPR046830 -
Stsc211493g00002 569 Pfam Calmodulin binding protein-like N-terminal domain 100 247 IPR046831 -
Stsc211493g00002 569 MobiDBLite consensus disorder prediction 1 20 - -
Stsc211493g00002 569 Pfam Calmodulin binding protein C-terminal domain 330 390 IPR046829 -
Stsc211493g00002 569 PANTHER OS02G0177800 PROTEIN 53 462 IPR012416 GO:0005516
Stsc211493g00002 569 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211493g00002 Stsc-Chr211493 6755 9356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211493g00002 57 402 Calmodulin-binding Proteins AT5G57580 41.737 5.84e-85 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211493g00002 - - gmx:100805759 585.489